SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001170794
Gene Symbol: BACH2
Description: Homo sapiens BTB and CNC homology 1, basic leucine zipper transcription factor 2 (BACH2), transcript variant 2, mRNA.
Gene Location: chr6(-):90636246-91006627
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.89926700G>A COSN7902522 8048316 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1238 accttttgGAGGAAaaaag
 0 CUUCCUCG m6b Created no TS -0.150000 No effect
hsa-miR-361-3p acctttTGGGGGAaaaaag
 0 UCCCCCAG m7a Disrupted -0.272000 -0.032000 1.580000
hsa-miR-3679-3p accttttGGGGGAAaaaag
 0 CUUCCCCC m7b Disrupted -0.575000 -0.048000 2.710000
hsa-miR-4446-5p accttttggGGGAAAaaag
 0 AUUUCCCU m6b Disrupted -0.103000 no TS No effect
hsa-miR-4691-5p acctttTGGAGGAaaaaag
 0 GUCCUCCA m7b Created 0.042000 -0.387000 -0.310000

Mutation Mutation ID Sample Name Cancer Type
chr6:g.89927263A>C COSN9915754 C0023T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-183-5p cacgctcTGCCATAaagac
 18
 UAUGGCAC m7a Created -0.141000 -0.210000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr6:g.89928789G>T COSN4958788 SS6003311 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-103a-3p gatgATGCTGCagtggaaa
 13
 AGCAGCAU m7b Disrupted -0.023000 -0.074000 -0.030000
hsa-miR-107 gatgATGCTGCagtggaaa
 13
 AGCAGCAU m7b Disrupted -0.023000 -0.074000 -0.010000
hsa-miR-1184 gatgatGCTGCAGtggaaa
 7
 CCUGCAGC m7b Disrupted -0.136000 -0.075000 No effect
hsa-miR-1273g-3p gatgatgctGCAGTGGaaa
 1
 ACCACUGC m7b (m7b->m6b) 0.062000 0.144000 1.970000
hsa-miR-181a-2-3p gatgatgctTCAGTGGaaa
 1
 ACCACUGA m7b (m6b->m7b) -0.041000 -0.070000 -0.050000
hsa-miR-4310 gatgATGCTGCagtggaaa
 2
 GCAGCAUU m7a Disrupted 0.006000 0.006000 -0.010000
hsa-miR-4418 gatgatgCTGCAGTGgaaa
 16
 CACUGCAG m8a Disrupted 0.104000 0.064000 No effect
hsa-miR-509-3-5p gatgatgCTGCAGTggaaa
 16
 UACUGCAG m7b Disrupted 0.114000 0.055000 No effect
hsa-miR-509-5p gatgatgCTGCAGTggaaa
 16
 UACUGCAG m7b Disrupted 0.129000 0.061000 No effect
hsa-miR-103a-3p gatgATGCTGCagtggaaa
 13
 AGCAGCAU m7b Disrupted -0.023000 -0.074000 -0.030000
hsa-miR-107 gatgATGCTGCagtggaaa
 13
 AGCAGCAU m7b Disrupted -0.023000 -0.074000 -0.010000
hsa-miR-1184 gatgatGCTGCAGtggaaa
 7
 CCUGCAGC m7b Disrupted -0.136000 -0.075000 No effect
hsa-miR-1273g-3p gatgatgctGCAGTGGaaa
 1
 ACCACUGC m7b (m7b->m6b) 0.062000 0.144000 1.970000
hsa-miR-181a-2-3p gatgatgctTCAGTGGaaa
 1
 ACCACUGA m7b (m6b->m7b) -0.041000 -0.070000 -0.050000
hsa-miR-4310 gatgATGCTGCagtggaaa
 2
 GCAGCAUU m7a Disrupted 0.006000 0.006000 -0.010000
hsa-miR-4418 gatgatgCTGCAGTGgaaa
 16
 CACUGCAG m8a Disrupted 0.104000 0.064000 No effect
hsa-miR-509-3-5p gatgatgCTGCAGTggaaa
 16
 UACUGCAG m7b Disrupted 0.114000 0.055000 No effect
hsa-miR-509-5p gatgatgCTGCAGTggaaa
 16
 UACUGCAG m7b Disrupted 0.129000 0.061000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr6:g.89928936G>T COSN8514915 J46_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3910 gggTGCCTTTattaaaatc
 19
 AAAGGCAU m7a (m6b->m7a) -0.235000 -0.235000 -0.920000
hsa-miR-4484 gggtGCCTTTattaaaatc
 1
 AAAAGGCG m6b Created 0.010000 0.027000 -0.020000
hsa-miR-548an gggTGCCTTTattaaaatc
 9
 AAAAGGCA m7b (m6c->m7b) 0.184000 0.262000 -0.150000
hsa-miR-5590-3p gggtgcCTTTATTaaaatc
 1
 AAUAAAGU m7a Created 0.101000 0.096000 -0.360000

Mutation Mutation ID Sample Name Cancer Type
chr6:g.89929581G>T COSN1338261 HCC104T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-5197-5p ttcTGCCATTGgaactggt
 10
 CAAUGGCA m8a Created -0.030000 0.041000 -0.030000
hsa-miR-5197-5p ttcTGCCATTGgaactggt
 0 CAAUGGCA m8a Created -0.03 0.041 -0.03

Mutation Mutation ID Sample Name Cancer Type
chr6:g.89929682G>A COSN14697919 CHC433T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1291 agcaggggCAGGGCCtctt
 0 UGGCCCUG m7b Created 0.017000 -0.016000 -0.380000
hsa-miR-1913 agcaGGGGCAGggcctctt
 0 UCUGCCCC m7b Created -0.080000 -0.117000 -0.040000
hsa-miR-3173-5p agcagggGCAGGGCctctt
 4
 UGCCCUGC m7b Created -0.130000 -0.141000 -0.100000
hsa-miR-324-3p agcaGGGGCAGggcctctt
 0 ACUGCCCC m7b Created -0.070000 -0.116000 -0.410000

Mutation Mutation ID Sample Name Cancer Type
chr6:g.89931136C>T COSN15411175 0064_CRUK_PC_0064_T1_DNA [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1262 gaaagtttTCACCCAggga
 7
 AUGGGUGA m7b Disrupted -0.062000 no TS 0.040000
hsa-miR-4701-3p gaaagtttTCACCCAggga
 7
 AUGGGUGA m7b Disrupted -0.034000 no TS No effect
hsa-miR-548ac gaaaGTTTTTacccaggga
 0 CAAAAACC m6b Created 0.263000 0.436000 No effect
hsa-miR-548ae gaaAGTTTTTacccaggga
 0 CAAAAACU m7b (m6c->m7b) 0.031000 0.237000 No effect
hsa-miR-548ah-3p gaaAGTTTTTacccaggga
 0 CAAAAACU m7b (m6c->m7b) 0.031000 0.237000 No effect
hsa-miR-548aj-3p gaaAGTTTTTAcccaggga
 0 UAAAAACU m8a Created 0.031000 0.237000 No effect
hsa-miR-548am-3p gaaAGTTTTTacccaggga
 0 CAAAAACU m7b (m6c->m7b) 0.031000 0.237000 No effect
hsa-miR-548aq-3p gaaAGTTTTTacccaggga
 0 CAAAAACU m7b (m6c->m7b) 0.031000 0.237000 No effect
hsa-miR-548d-3p gaaaGTTTTTacccaggga
 0 CAAAAACC m6b Created 0.284000 0.453000 No effect
hsa-miR-548e gaaAGTTTTTacccaggga
 16
 AAAAACUG m7a (m6b->m7a) 0.016000 0.016000 No effect
hsa-miR-548f gaaAGTTTTTacccaggga
 16
 AAAAACUG m7a (m6b->m7a) 0.016000 0.016000 -0.010000
hsa-miR-548h-3p gaaaGTTTTTacccaggga
 0 CAAAAACC m6b Created 0.263000 0.432000 No effect
hsa-miR-548x-3p gaaAGTTTTTAcccaggga
 0 UAAAAACU m8a Created 0.031000 0.237000 No effect
hsa-miR-548z gaaaGTTTTTacccaggga
 0 CAAAAACC m6b Created 0.263000 0.432000 No effect
hsa-miR-555 gaaagtttTTACCCaggga
 0 AGGGUAAG m6b Created no TS -0.014000 -6.930000
hsa-miR-570-3p gaaaGTTTTCacccaggga
 4
 CGAAAACA m6b Disrupted 0.155000 0.028000 0.010000

Mutation Mutation ID Sample Name Cancer Type
chr6:g.89931229C>T COSN2182655 RK052_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1273f tttggaCATCTCactcaaa
 7
 GGAGAUGG m6b Disrupted 0.050000 0.001000 No effect
hsa-miR-203 tttggaCATTTCACtcaaa
 0 GUGAAAUG m8a Created 0.157000 0.226000 -0.230000
hsa-miR-2964a-5p tttGGACATCTcactcaaa
 0 AGAUGUCC m8a Disrupted -0.087000 0.024000 0.170000
hsa-miR-4708-5p tttggaCATCTCactcaaa
 7
 AGAGAUGC m6b Disrupted 0.079000 0.058000 No effect

Mutation Mutation ID Sample Name Cancer Type
chr6:g.89931296C>T COSN14716798 CHC433T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-20a-3p aagtttaAATGCAGataga
 0 ACUGCAUU m7b Created no TS -0.097000 -4.830000
hsa-miR-4520a-5p aagtttaaACGCAGataga
 0 CCUGCGUG m6b Disrupted -0.128000 no TS 2.180000
hsa-miR-4520b-5p aagtttaaACGCAGataga
 0 CCUGCGUG m6b Disrupted -0.128000 no TS 2.180000


Mutation Mutation ID Sample Name Cancer Type
chr6:g.89931609T>G COSN7902523 8044594 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr6:g.89931839G>T COSN5092152 HX24T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-3123 tcttcttttTTCTCTGatg
 16
 CAGAGAAU m7a (m6a->m7a) -0.074000 -0.074000 -0.140000
hsa-miR-3919 tcttcttttTTCTCTGatg
 16
 GCAGAGAA m7b (m6b->m7b) -0.192000 -0.331000 0.100000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



Genome Browser