| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_004655 |
|---|---|
| Gene Symbol: | AXIN2 |
| Description: | Homo sapiens axin 2 (AXIN2), mRNA. |
| Gene Location: | chr17(-):63524682-63557740 |
| Browse Associations | |
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| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr17:g.65528586A>T | COSN15586347 | C0086T | [kidney][NS][other][neoplasm] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-5590-3p |
gtagcCTTTATTaaaattt |
0 | AAUAAAGU | m7a | Disrupted | NA | NA |
1.080000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr17:g.65528611A>G | COSN1725993 | RK096_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-3529-3p |
acaataaTTGTTGTaatta |
0 | AACAACAA | m7b | Created | no TS | -0.335000 |
-0.020000 |
| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr17:g.65529295C>T | COSN5419347 | RK156_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-425-5p |
accatgttGTGTCATcatc |
0 | AAUGACAC | m7b | Created | no TS | -0.113000 |
-3.460000 |
| hsa-miR-5003-5p |
accaTGTTGTGtcatcatc |
0 | UCACAACA | m7b | Created | no TS | -0.081000 |
-5.550000 |
| hsa-miR-642a-3p |
accatgtTGTGTCatcatc |
0 | AGACACAU | m6b | Created | no TS | -0.053000 | No effect |
| hsa-miR-642b-3p |
accatgtTGTGTCatcatc |
0 | AGACACAU | m6b | Created | no TS | -0.056000 | No effect |