SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000052
Gene Symbol: ATP7A
Description: Homo sapiens ATPase, Cu++ transporting, alpha polypeptide (ATP7A), mRNA.
Gene Location: chrX(+):77166193-77305892

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.78050011A>G ICGC_sm179954 RK035_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-138-2-3p ttacaAAATAGaaaaaata
 2
 GCUAUUUC m6b Disrupted 0.055 0.072 No effect
hsa-miR-4482-3p ttacaaAATAGAAAaaata
 0 UUUCUAUU m8a Disrupted -0.18 -0.003 No effect
hsa-miR-587 ttacaaaATGGAAAaaata
 0 UUUCCAUA m7a Created no TS -0.091 -8.26

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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