SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000050
Gene Symbol: ASS1
Description: Homo sapiens argininosuccinate synthase 1 (ASS1), transcript variant 1, mRNA.
Gene Location: chr9(+):133320093-133376661
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.130501033A>G COSN5119561 HX29T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1183 ccgtgTACAGTGaggagct
 0 CACUGUAG m7a Created NA NA No effect
hsa-miR-1304-3p ccgtgtaCAGTGAGgagct
 0 UCUCACUG m7b Created no TS 0.000000 No effect
hsa-miR-4289 ccgtgtACAATGaggagct
 8
 GCAUUGUG m6b Disrupted 0.000000 no TS No effect

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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