SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

RefSeq ID: NM_000048
Gene Symbol: ASL
Description: Homo sapiens argininosuccinate lyase (ASL), transcript variant 2, mRNA.
Gene Location: chr7(+):65540775-65558329
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr7:g.66092989C>G COSN9506234 AOCS-155-3-5 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4419a cctggCTCCCTCgttgctg
4
UGAGGGAG m7b Disrupted -0.133000 no TS 0.190000
hsa-miR-4510 cctggCTCCCTCgttgctg
4
UGAGGGAG m7b Disrupted -0.114000 no TS 1.270000
hsa-miR-505-5p ccTGGCTCCCtcgttgctg
0 GGGAGCCA m8a (m8a->m7a) -0.122000 -0.122000 -0.540000

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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