SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001135608 |
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Gene Symbol: | ARHGAP26 |
Description: | Homo sapiens Rho GTPase activating protein 26 (ARHGAP26), transcript variant 2, mRNA. |
Gene Location: | chr5(+):142150291-142608572 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143222460C>T | COSN9409050 | AOCS-159-1-9 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-148b-5p |
gggccccagCAGAACTgct |
0 | AAGUUCUG | m7b | (m7b->m6c) | 0.000000 | 0.050000 | No effect |
hsa-miR-3168 |
gggccccagTAGAACTgct |
0 | GAGUUCUA | m7b | (m6c->m7b) | no TS | 0.000000 | No effect |
hsa-miR-3692-5p |
gggccCCAGCAGaactgct |
7 |
CCUGCUGG | m7b | Disrupted | 0.000000 | -0.083000 | No effect |
hsa-miR-4667-5p |
gggCCCCAGTagaactgct |
2 |
ACUGGGGA | m7a | (m6a->m7a) | 0.148000 | 0.148000 | No effect |
hsa-miR-4731-5p |
gggCCCCAGCAgaactgct |
1 |
UGCUGGGG | m8a | Disrupted | -0.019000 | -0.024000 | No effect |
hsa-miR-5589-5p |
gggcCCCAGCagaactgct |
1 |
GGCUGGGU | m6b | Disrupted | -0.042000 | -0.037000 | No effect |
hsa-miR-637 |
gggCCCCAGTagaactgct |
2 |
ACUGGGGG | m7a | (m6a->m7a) | -0.015000 | -0.015000 | No effect |
hsa-miR-93-3p |
gggcccCAGCAGaactgct |
7 |
ACUGCUGA | m6b | Disrupted | 0.000000 | -0.428000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143224119T>G | COSN6510517 | HX20T | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3613-3p |
ttttTTTTTTGaaaagata |
12 |
ACAAAAAA | m7b | Disrupted | 1.076000 | 0.979000 |
0.010000 |
hsa-miR-607 |
tttttttTTTGAAaagata |
2 |
GUUCAAAU | m6b | Disrupted | 0.662000 | 0.541000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143224468G>C | COSN2073882 | RK180_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3923 |
gcctactTACTAGTaagat |
2 |
AACUAGUA | m7b | Created | 0.118000 | 0.115000 |
-1.150000 |
hsa-miR-628-3p |
gcctacTTACTAGtaagat |
0 | UCUAGUAA | m7b | Created | no TS | -0.001000 |
-2.270000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143224856A>G | COSN14867125 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143225059C>T | COSN7878186 | 8061105 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4719 |
aggttagATTTGTGAacct |
2 |
UCACAAAU | m8a | Created | 0.159000 | 0.358000 |
-4.100000 |
hsa-miR-4762-5p |
aggttAGATTTGtgaacct |
5 |
CCAAAUCU | m7b | Created | 0.201000 | 0.288000 |
-0.020000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143225226G>T | ICGC_BA634994-2A78-11E2-9C69-1CFD496BB9B8 | CPCG_0103_Pr_P_P3 | ProstateCancer(OICR,CA) | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1285-3p |
tcactctgtTGCCCAGgct |
0 | UCUGGGCA | m7b | (m6c->m7b) | -0.017 | -0.079 |
-4.73 |
hsa-miR-196a-3p |
tcactcTGTTGCCcaggct |
0 | CGGCAACA | m7b | Created | -0.335 | -0.282 |
-0.02 |
hsa-miR-3187-5p |
tcactctgtTGCCCAGGct |
0 | CCUGGGCA | m8a | (m7b->m8a) | -0.008 | -0.014 |
-0.01 |
hsa-miR-4726-5p |
tcactctgTGGCCCaggct |
0 | AGGGCCAG | m6b | Disrupted | -0.034 | -0.013 | No effect |
hsa-miR-5189 |
tcactctgtTGCCCAGgct |
0 | UCUGGGCA | m7b | (m6c->m7b) | -0.036 | -0.023 | No effect |
hsa-miR-612 |
tcactctgtTGCCCAGgct |
0 | GCUGGGCA | m7b | (m6c->m7b) | 0.002 | 0.005 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143225373A>G | ICGC_C26AB140-2A78-11E2-BDED-1EFD496BB9B8 | CPCG_0103_Pr_P_P4 | ProstateCancer(OICR,CA) | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3675-3p |
tttttagTAGAGATGgggt |
0 | CAUCUCUA | m8a | Created | no TS | 0.106 |
-0.01 |
hsa-miR-4684-5p |
tttttaGTAGAGAtggggt |
0 | CUCUCUAC | m7b | Created | no TS | 0.003 |
-0.95 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143225463C>A | ICGC_7958BC86-2A78-11E2-96E7-04FD496BB9B8 | CPCG_0102_Pr_P_P1 | ProstateCancer(OICR,CA) | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-619 |
gctgggatTCCAGGTgtga |
0 | GACCUGGA | m7b | Disrupted | -0.05 | -0.066 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143225607T>C | COSN14789107 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3926 |
ctgtagacaTTTGGCCcca |
1 |
UGGCCAAA | m7b | (m7b->m6c) | 0.029000 | no TS | No effect |
hsa-miR-4480 |
ctgtagacACTTGGCccca |
8 |
AGCCAAGU | m7b | Created | -0.267000 | -0.187000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143225612C>T | COSN6865813 | RK308_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3619-3p |
gacattTGGTCCCagcttc |
0 | GGGACCAU | m7a | Created | NA | NA | No effect |
hsa-miR-3649 |
gacatttGGTCCCagcttc |
0 | AGGGACCU | m6b | Created | no TS | -0.078000 |
-2.170000 |
hsa-miR-3926 |
gacaTTTGGCCccagcttc |
1 |
UGGCCAAA | m7b | Disrupted | 0.029000 | no TS | No effect |
hsa-miR-4731-5p |
gacatttggCCCCAGCttc |
1 |
UGCUGGGG | m7b | (m7b->m6c) | -0.019000 | 0.014000 |
0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143226004C>T | COSN14763690 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-18a-3p |
actttAGGGCAGatgagga |
3 |
ACUGCCCU | m7b | Disrupted | -0.137000 | no TS |
0.070000 |
hsa-miR-18b-3p |
actTTAGGGCAgatgagga |
2 |
UGCCCUAA | m8a | Disrupted | -0.120000 | no TS |
0.060000 |
hsa-miR-3157-3p |
acttTAGGGCAGatgagga |
2 |
CUGCCCUA | m8a | Disrupted | -0.082000 | no TS | No effect |
hsa-miR-324-3p |
actttaGGGCAGatgagga |
3 |
ACUGCCCC | m6b | Disrupted | -0.049000 | no TS | No effect |
hsa-miR-452-3p |
actttagggCAGATGAGga |
2 |
CUCAUCUG | m8a | (m8a->m7b) | 0.142000 | 0.064000 |
0.010000 |
hsa-miR-874 |
actttAGGGCAGatgagga |
0 | CUGCCCUG | m7a | Disrupted | NA | NA |
0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143226181C>T | COSN7878187 | 8015127 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1283 |
acaaaatTTTGTAGctaaa |
0 | UCUACAAA | m7b | Created | no TS | 0.068000 | No effect |
hsa-miR-187-5p |
acaaaattTTGTAGCtaaa |
6 |
GGCUACAA | m7b | Created | -0.017000 | -0.032000 | No effect |
hsa-miR-221-3p |
acaaaatttTGTAGCTaaa |
6 |
AGCUACAU | m7a | (m6b->m7a) | 0.011000 | 0.011000 | No effect |
hsa-miR-222-3p |
acaaaatttTGTAGCTaaa |
6 |
AGCUACAU | m7a | (m6b->m7a) | 0.004000 | 0.004000 | No effect |
hsa-miR-4282 |
acaAAATTTTgtagctaaa |
3 |
UAAAAUUU | m7b | (m6b->m7b) | 0.267000 | 0.502000 | No effect |
hsa-miR-548v |
acaaaatttTGTAGCTaaa |
6 |
AGCUACAG | m7a | (m6b->m7a) | 0.009000 | 0.009000 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143226224A>G | ICGC_CF8A12BC-2A78-11E2-951E-21FD496BB9B8 | CPCG_0103_Pr_P_P5 | ProstateCancer(OICR,CA) | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1295b-3p |
ctcacGCCTATaatcccag |
0 | AAUAGGCC | m6b | Disrupted | -0.46 | -0.472 | No effect |
hsa-miR-3937 |
ctcaCGCCTGTaatcccag |
0 | ACAGGCGG | m7a | Created | NA | NA | No effect |
hsa-miR-4438 |
ctcacGCCTGTaatcccag |
0 | CACAGGCU | m6b | Created | 0.067 | 0.104 | No effect |
hsa-miR-5095 |
ctcacGCCTGTAAtcccag |
0 | UUACAGGC | m8a | Created | 0.095 | 0.15 |
-4.36 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143226304A>C | 0_204 | Prostate cancer | ||||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-193b-5p |
gacggtgAAACCCCGtctc |
2 |
CGGGGUUU | m8a | Disrupted | 0.047 | no TS | No effect |
hsa-miR-4787-5p |
gacggtgaACCCCCGtctc |
2 |
GCGGGGGU | m7b | Created | no TS | -0.145 | No effect |
hsa-miR-5096 |
gacGGTGAAACcccgtctc |
1 |
GUUUCACC | m8a | Disrupted | 0.31 | 0.164 |
0.01 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143226736C>A | COSN14778266 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4302 |
gtcagacCACACTGtcttt |
0 | CCAGUGUG | m7b | Disrupted | -0.098000 | -0.126000 |
0.030000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143227406T>C | COSN14755262 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1253 |
caggatgTCTTCTCaccca |
2 |
AGAGAAGA | m7b | Disrupted | 0.174000 | 0.029000 |
0.030000 |
hsa-miR-3617 |
caggATGTCTTctcaccca |
0 | AAAGACAU | m7b | Disrupted | 0.157000 | no TS | No effect |
hsa-miR-5004-5p |
caggaTGTCCTCtcaccca |
1 |
UGAGGACA | m7b | Created | -0.042000 | -0.010000 | No effect |
hsa-miR-641 |
caggATGTCTTctcaccca |
0 | AAAGACAU | m7b | Disrupted | 0.167000 | no TS | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143227671G>C | COSN15453657 | AOCS-086-1-5 | [ovary][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-297 |
aaggcCATACAatccaggt |
0 | AUGUAUGU | m6b | Created | no TS | 0.088000 | No effect |
hsa-miR-3149 |
aaggcCATACAAtccaggt |
1 |
UUUGUAUG | m7b | Created | 0.117000 | 0.311000 | No effect |
hsa-miR-4320 |
aaggccatAGAATCCaggt |
6 |
GGGAUUCU | m7b | Disrupted | -0.352000 | -0.329000 | No effect |
hsa-miR-508-3p |
aaggccaTACAATCcaggt |
1 |
UGAUUGUA | m7b | Created | 0.022000 | 0.059000 | No effect |
hsa-miR-675-3p |
aaggcCATACAatccaggt |
0 | CUGUAUGC | m6b | Created | no TS | 0.063000 |
-1.100000 |
hsa-miR-297 |
aaggcCATACAatccaggt |
0 | AUGUAUGU | m6b | Created | no TS | 0.088000 | No effect |
hsa-miR-3149 |
aaggcCATACAAtccaggt |
1 |
UUUGUAUG | m7b | Created | 0.117000 | 0.311000 | No effect |
hsa-miR-4320 |
aaggccatAGAATCCaggt |
6 |
GGGAUUCU | m7b | Disrupted | -0.352000 | -0.329000 | No effect |
hsa-miR-508-3p |
aaggccaTACAATCcaggt |
1 |
UGAUUGUA | m7b | Created | 0.022000 | 0.059000 | No effect |
hsa-miR-675-3p |
aaggcCATACAatccaggt |
0 | CUGUAUGC | m6b | Created | no TS | 0.063000 |
-1.100000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143227873T>C | COSN4843971 | tumor_4135350 | [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][Burkitt_lymphoma] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-4677-3p |
aaaaagcgaTCACAGAaaa |
6 |
UCUGUGAG | m7a | (m7a->m6b) | -0.009000 | no TS |
1.320000 |
hsa-miR-4679 |
aaaaagcgATCACAGAaaa |
0 | UCUGUGAU | m8a | Disrupted | -0.057000 | no TS |
0.190000 |
hsa-miR-4790-5p |
aaAAAGCGATcacagaaaa |
0 | AUCGCUUU | m8a | (m8a->m7a) | -0.188000 | -0.160000 |
0.010000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.143228381C>T | COSN7878188 | 8033471 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3183 |
caAGAGAGGCtgtggatgg |
5 |
GCCUCUCU | m8a | (m8a->m7a) | -0.088000 | -0.115000 |
-0.010000 |