SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_000045 |
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Gene Symbol: | ARG1 |
Description: | Homo sapiens arginase, liver (ARG1), transcript variant 2, mRNA. |
Gene Location: | chr6(+):131894364-131905468 |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
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chr6:g.131583953A>G | COSN6303904 | RK187_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3160-5p |
ggcataattAGAAAGCtaa |
1 |
GGCUUUCU | m7b | (m7b->m6c) | -0.252000 | no TS |
1.720000 |
hsa-miR-4263 |
ggcataaTTAGAAagctaa |
0 | AUUCUAAG | m6b | Disrupted | -0.192000 | -0.157000 |
1.200000 |
hsa-miR-4275 |
ggcaTAATTGGaaagctaa |
0 | CCAAUUAC | m7a | Created | NA | NA |
-0.740000 |
hsa-miR-4735-5p |
ggcatAATTAGaaagctaa |
0 | CCUAAUUU | m6b | Disrupted | -0.025000 | no TS |
5.760000 |
hsa-miR-576-5p |
ggcataATTAGAAagctaa |
0 | AUUCUAAU | m7b | Disrupted | -0.225000 | -0.012000 |
1.330000 |