SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000044
Gene Symbol: AR
Description: Homo sapiens androgen receptor (AR), transcript variant 1, mRNA.
Gene Location: chrX(+):66763873-66944119
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.67724094A>G ICGC_sm119604 RK023_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-1324 gtggctcCTGTCTGtgttt
 0 CCAGACAG m7b Created no TS -0.144 -0.01
hsa-miR-4524b-3p gtggctCCTGTCTgtgttt
 0 GAGACAGG m7b Created 0.042 -0.114 -1.09

Mutation Mutation ID Sample Name Cancer Type
chrX:g.67729083T>C 9_54632 CRC-5-Tumor Colorectal adenocarcinoma
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4426 caagcgctCCATCTTtcac
 1
 GAAGAUGG m7b Created no TS 0.052 No effect
hsa-miR-4534 caagcgCTCCATCtttcac
 1
 GGAUGGAG m7b Created 0.019 0.062 No effect
hsa-miR-4647 caagcgctCCATCTTtcac
 1
 GAAGAUGG m7b Created no TS 0.043 -0.75
hsa-miR-4662a-3p caagcgctCTATCTTTcac
 1
 AAAGAUAG m8a Disrupted 0.078 -0.004 No effect
hsa-miR-4662b caagcgctCCATCTTTcac
 1
 AAAGAUGG m8a Created no TS 0.052 No effect

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



Genome Browser