SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_001003954
Gene Symbol: ANXA13
Description: Homo sapiens annexin A13 (ANXA13), transcript variant 2, mRNA.
Gene Location: chr8(-):124693033-124749647
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.123680839A>C COSN9595360 AOCS-108-1-7 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-105-5p tgtgtgttcCATTTGAaag
 6
 UCAAAUGC m7a (m6a->m7a) -0.193000 -0.255000 -0.040000
hsa-miR-4694-3p tgtgtgtTCCATTTGaaag
 0 CAAAUGGA m8a Created no TS -0.141000 -2.860000

Mutation Mutation ID Sample Name Cancer Type
chr8:g.123681202C>G COSN2259146 RK003_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4484 tggaacCGCCTTTgtcaag
 2
 AAAAGGCG m7b Disrupted -0.169000 no TS 4.590000
hsa-miR-4484 tggaacCGCCTTTgtcaag
 2
 AAAAGGCG m7b Disrupted -0.169000 no TS 4.590000
hsa-miR-4484 tggaacCGCCTTTgtcaag
 0 AAAAGGCG m7b Disrupted -0.169 no TS 4.59

Mutation Mutation ID Sample Name Cancer Type
chr8:g.123681204G>A COSN168415 GC8_T [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-218-1-3p ggtGGAACCAcctttgtca
 0 AUGGUUCC m7b (m6c->m7b) no TS -0.180000 -0.560000
hsa-miR-4484 ggtggaacCGCCTTTgtca
 2
 AAAAGGCG m7b Disrupted -0.169000 no TS 5.680000
hsa-miR-876-3p ggtggAACCACCtttgtca
 0 UGGUGGUU m7b Created no TS -0.185000 -0.100000
hsa-miR-218-1-3p ggtGGAACCAcctttgtca
 0 AUGGUUCC m7b (m6c->m7b) no TS -0.180000 -0.560000
hsa-miR-4484 ggtggaacCGCCTTTgtca
 2
 AAAAGGCG m7b Disrupted -0.169000 no TS 5.680000
hsa-miR-876-3p ggtggAACCACCtttgtca
 0 UGGUGGUU m7b Created no TS -0.185000 -0.100000
hsa-miR-218-1-3p ggtGGAACCAcctttgtca
 0 AUGGUUCC m7b (m6c->m7b) no TS -0.18 -0.56
hsa-miR-4484 ggtggaacCGCCTTTgtca
 0 AAAAGGCG m7b Disrupted -0.169 no TS 5.68
hsa-miR-876-3p ggtggAACCACCtttgtca
 0 UGGUGGUU m7b Created no TS -0.185 -0.1

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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