SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_152363 |
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Gene Symbol: | ANKLE1 |
Description: | Homo sapiens ankyrin repeat and LEM domain containing 1 (ANKLE1), mRNA. |
Gene Location: | chr19(+):17392453-17398454 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr19:g.17286656G>T | COSN8992570 | PTC-14C | [thyroid][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr19:g.17286670G>T | COSN8992571 | PTC-7C | [thyroid][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr19:g.17286672G>T | COSN8992573 | PTC-7C | [thyroid][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr19:g.17286674G>T | COSN8992576 | PTC-14C | [thyroid][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr19:g.17286690G>T | COSN8992577 | PTC-6C | [thyroid][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr19:g.17286692T>G | COSN8992578 | PTC-28C | [thyroid][NS][other][neoplasm] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr19:g.17287168C>T | COSN7355443 | 8067211 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3937 |
ggtggctcaCGCCTGTaat |
0 | ACAGGCGG | m7a | (m7a->m6b) | NA | NA |
5.380000 |
hsa-miR-4514 |
ggtggctcaTGCCTGTaat |
0 | ACAGGCAG | m7a | (m6b->m7a) | NA | NA | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr19:g.17287180T>C | ICGC_E0C4EFB6-2A78-11E2-B303-24FD496BB9B8 | CPCG_0103_Pr_P_P6 | ProstateCancer(OICR,CA) | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-204-3p |
ctgtaaTCCCAGCattttg |
0 | GCUGGGAA | m7a | Created | -0.258 | -0.258 |
-1.51 |
hsa-miR-3146 |
ctgtaatcCTAGCATtttg |
0 | CAUGCUAG | m7b | Disrupted | -0.218 | -0.126 |
1.69 |
hsa-miR-3159 |
ctgTAATCCTAgcattttg |
1 |
UAGGAUUA | m8a | Disrupted | -0.085 | no TS |
2.99 |
hsa-miR-5089 |
ctgtAATCCCAgcattttg |
0 | GUGGGAUU | m7b | Created | -0.055 | -0.099 | No effect |
hsa-miR-5589-5p |
ctgtaatCCCAGCattttg |
0 | GGCUGGGU | m6b | Created | no TS | -0.133 |
-0.08 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr19:g.17287585C>T | COSN8256862 | PCSI_0083_Pa_P_526 | [pancreas][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3714 |
agccCTGCCTTgtctatgg |
0 | GAAGGCAG | m7b | Created | no TS | -0.146000 | No effect |
hsa-miR-4436b-3p |
agccCTGCCCTGtctatgg |
1 |
CAGGGCAG | m8a | Disrupted | -0.172000 | no TS |
3.460000 |
hsa-miR-4524b-3p |
agccctgcCCTGTCTatgg |
1 |
GAGACAGG | m7b | Disrupted | -0.350000 | no TS |
3.470000 |
hsa-miR-4763-3p |
agCCCTGCCTtgtctatgg |
1 |
AGGCAGGG | m8a | (m7a->m8a) | -0.249000 | -0.276000 |
0.720000 |
hsa-miR-940 |
agcCCTGCCTTgtctatgg |
0 | AAGGCAGG | m8a | Created | no TS | -0.177000 |
3.680000 |