| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| RefSeq ID: | NM_000030 |
|---|---|
| Gene Symbol: | AGXT |
| Description: | Homo sapiens alanine-glyoxylate aminotransferase (AGXT), mRNA. |
| Gene Location: | chr2(+):241808161-241818536 |
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| Mutation | Mutation ID | Sample Name | Cancer Type | |||||
|---|---|---|---|---|---|---|---|---|
| chr2:g.240878925A>G | COSN5500962 | RK134_C01 | [liver][NS][carcinoma][NS] | |||||
| miRNA Targets Table | ||||||||
| miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
| hsa-miR-1247-5p |
cctggGGACGGGaaagcca |
0 | ACCCGUCC | m7b | Created | no TS | -0.483000 |
-4.760000 |
| hsa-miR-3074-5p |
cctggggaCAGGAAagcca |
1 |
GUUCCUGC | m6b | Disrupted | -0.018000 | no TS |
0.030000 |
| hsa-miR-3124-3p |
cctggggacAGGAAAGcca |
1 |
ACUUUCCU | m7b | (m7b->m6c) | -0.028000 | no TS |
1.440000 |
| hsa-miR-4421 |
cctgggGACAGGaaagcca |
0 | ACCUGUCU | m6b | Disrupted | -0.109000 | no TS |
0.390000 |
| hsa-miR-5699 |
cctgggGACAGGAaagcca |
0 | UCCUGUCU | m7a | Disrupted | -0.109000 | no TS |
0.690000 |