SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
RefSeq ID: NM_000029
Gene Symbol: AGT
Description: Homo sapiens angiotensinogen (serpin peptidase inhibitor, clade A, member 8) (AGT), mRNA.
Gene Location: chr1(-):230838271-230850336
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.230703091T>C 11_246 2542 Breast cancer
miRNA Targets Table
miR ID miRSite Conservation miRSeed SeedClass FuncClass Wildtype CS+ Mutant CS+ PITA score change
hsa-miR-4257 ccctggCCTCTGaggcaaa
 5
 CCAGAGGU m6b Created no TS -0.083 -1.44
hsa-miR-4753-5p cccTGGCCTTtgaggcaaa
 6
 CAAGGCCA m7b (m7b->m6c) -0.146 no TS No effect

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.



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