SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_000024 |
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Gene Symbol: | ADRB2 |
Description: | Homo sapiens adrenergic, beta-2-, receptor, surface (ADRB2), mRNA. |
Gene Location: | chr5(+):148206155-148208197 |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr5:g.148828580C>T | COSN2076160 | RK007_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-1178 |
ttgttttccTGAGCAAagt |
0 | UUGCUCAC | m7a | (m6b->m7a) | no TS | -0.156000 |
-11.230000 |
hsa-miR-3664-3p |
ttgtttTCCTGAGcaaagt |
0 | UCUCAGGA | m7b | Created | no TS | -0.251000 |
-3.100000 |
hsa-miR-423-3p |
ttgttttcCCGAGCaaagt |
0 | AGCUCGGU | m6b | Disrupted | -0.308000 | no TS |
16.960000 |
hsa-miR-425-3p |
ttgttTTCCCGAgcaaagt |
0 | AUCGGGAA | m7b | Disrupted | -0.313000 | no TS |
2.770000 |
hsa-miR-4518 |
ttgttttCCTGAGCaaagt |
0 | GCUCAGGG | m7a | Created | NA | NA |
-4.020000 |
hsa-miR-4668-5p |
ttgTTTTCCCgagcaaagt |
0 | AGGGAAAA | m7b | (m7b->m6b) | -0.116000 | no TS |
3.040000 |
hsa-miR-873-5p |
ttgttTTCCTGagcaaagt |
0 | GCAGGAAC | m6b | Created | no TS | -0.106000 |
-0.230000 |
hsa-miR-1178 |
ttgttttccTGAGCAAagt |
0 | UUGCUCAC | m7a | (m6b->m7a) | no TS | -0.156 |
-11.23 |
hsa-miR-3664-3p |
ttgtttTCCTGAGcaaagt |
0 | UCUCAGGA | m7b | Created | no TS | -0.251 |
-3.1 |
hsa-miR-423-3p |
ttgttttcCCGAGCaaagt |
0 | AGCUCGGU | m6b | Disrupted | -0.308 | no TS |
16.96 |
hsa-miR-425-3p |
ttgttTTCCCGAgcaaagt |
0 | AUCGGGAA | m7b | Disrupted | -0.313 | no TS |
2.77 |
hsa-miR-4518 |
ttgttttCCTGAGCaaagt |
0 | GCUCAGGG | m7a | Created | NA | NA |
-4.02 |
hsa-miR-4668-5p |
ttgTTTTCCCgagcaaagt |
0 | AGGGAAAA | m7b | (m7b->m6b) | -0.116 | no TS |
3.04 |
hsa-miR-873-5p |
ttgttTTCCTGagcaaagt |
0 | GCAGGAAC | m6b | Created | no TS | -0.106 |
-0.23 |
Location | SNP ID | Ancestral Allele |
Allele | miR ID | Conservation | miRSite | FuncClass | Validation | context+ score change |
---|---|---|---|---|---|---|---|---|---|
148828356 | rs76224012 | A | A |
hsa-miR-7154-5p hsa-miR-8060 |
2 2 |
attTTCATGActt attTTCATGActt |
Disrupted Disrupted |
N N |
-0.153 -0.051 |
C |
hsa-miR-873-5p |
2 |
attTTCCTGActt |
Created |
N |
-0.096 |
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148828581 | rs150245162 | G | G |
hsa-miR-423-3p hsa-miR-425-3p |
0 |
tttcCCGAGCAaa tTTCCCGAgcaaa |
Disrupted Disrupted |
N N |
-0.308 -0.313 |
A |
hsa-miR-1273e hsa-miR-3153 hsa-miR-450a-1-3p hsa-miR-4668-5p hsa-miR-6733-5p hsa-miR-6739-5p hsa-miR-6885-3p |
0 |
tttccCAAGCAAa TTTCCCAagcaaa tTTCCCAAgcaaa TTTCCCAagcaaa TTTCCCAagcaaa TTTCCCAagcaaa tttcccAAGCAAA |
Created Created Created Created Created Created Created |
N N N N N N N |
-0.14 -0.093 -0.176 -0.143 -0.103 -0.1 -0.051 |