SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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RefSeq ID: | NM_001177800 |
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Gene Symbol: | ADIPOQ |
Description: | Homo sapiens adiponectin, C1Q and collagen domain containing (ADIPOQ), transcript variant 1, mRNA. |
Gene Location: | chr3(+):186560462-186576252 |
Browse Associations | |
Browse Pathways |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186854956T>G | COSN1273472 | HCC65T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-296-5p |
gctattttGGGCCCactgt |
0 | AGGGCCCC | m6b | Created | no TS | -0.233000 |
-0.040000 |
|
hsa-miR-3136-3p |
gctattTTGGGCCcactgt |
0 | UGGCCCAA | m7b | Created | no TS | -0.257000 |
-0.500000 |
|
hsa-miR-296-5p |
gctattttGGGCCCactgt |
0 | AGGGCCCC | m6b | Created | no TS | -0.233000 |
-0.040000 |
|
hsa-miR-3136-3p |
gctattTTGGGCCcactgt |
0 | UGGCCCAA | m7b | Created | no TS | -0.257000 |
-0.500000 |
|
hsa-miR-296-5p |
gctattttGGGCCCactgt |
0 | AGGGCCCC | m6b | Created | no TS | -0.233 |
-0.04 |
|
hsa-miR-3136-3p |
gctattTTGGGCCcactgt |
0 | UGGCCCAA | m7b | Created | no TS | -0.257 |
-0.5 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186855241C>T | COSN6758140 | RK308_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1275 |
taaaaccTCCCCCAagcag |
0 | GUGGGGGA | m7b | Disrupted | -0.291000 | no TS |
4.140000 |
|
hsa-miR-30c-1-3p |
taaaaccTCTCCCAagcag |
2 |
CUGGGAGA | m7b | Created | -0.158000 | -0.377000 |
-0.030000 |
|
hsa-miR-30c-2-3p |
taaaaccTCTCCCAagcag |
2 |
CUGGGAGA | m7b | Created | -0.172000 | -0.391000 |
-0.240000 |
|
hsa-miR-4525 |
taaaaccTCCCCCaagcag |
1 |
GGGGGGAU | m6b | Disrupted | -0.171000 | no TS |
1.800000 |
|
hsa-miR-4665-5p |
taaaaccTCCCCCAagcag |
0 | CUGGGGGA | m7b | Disrupted | -0.291000 | no TS |
2.960000 |
|
hsa-miR-4723-5p |
taaaacCTCCCCCAagcag |
0 | UGGGGGAG | m8a | Disrupted | -0.368000 | no TS |
4.120000 |
|
hsa-miR-5010-5p |
taaaaccTCCCCCaagcag |
1 |
AGGGGGAU | m6b | Disrupted | -0.168000 | no TS |
0.020000 |
|
hsa-miR-5698 |
taaaacCTCCCCCAagcag |
0 | UGGGGGAG | m8a | Disrupted | -0.378000 | no TS |
0.070000 |
|
hsa-miR-625-5p |
taaaaccTCCCCCaagcag |
1 |
AGGGGGAA | m6b | Disrupted | -0.161000 | no TS |
0.050000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186855652G>A | ICGC_9AD47E68-2A78-11E2-8335-12FD496BB9B8 | CPCG_0102_Pr_P_P2 | ProstateCancer(OICR,CA) | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1272 |
tggggttTCATCATgttgg |
0 | GAUGAUGA | m7b | Created | no TS | -0.013 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186855653T>C | ICGC_9AD4834A-2A78-11E2-8335-12FD496BB9B8 | CPCG_0102_Pr_P_P2 | ProstateCancer(OICR,CA) | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186856156T>C | COSN1273473 | HCC87T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-3173-3p |
aagccattgCCTCCTTgag |
0 | AAAGGAGG | m7b | (m6c->m7b) | -0.167000 | -0.142000 | No effect | |
hsa-miR-3612 |
aagccatTGCCTCCTtgag |
2 |
AGGAGGCA | m8a | Created | -0.076000 | -0.158000 |
-0.030000 |
|
hsa-miR-4428 |
aagccattgTCTCCTTGag |
0 | CAAGGAGA | m8a | (m8a->m7b) | 0.106000 | 0.023000 | No effect | |
hsa-miR-4695-5p |
aagccattGCCTCCTtgag |
1 |
CAGGAGGC | m7b | Created | -0.328000 | -0.410000 | No effect | |
hsa-miR-650 |
aagccatTGCCTCCTtgag |
2 |
AGGAGGCA | m8a | Created | -0.072000 | -0.154000 | No effect | |
hsa-miR-3173-3p |
aagccattgCCTCCTTgag |
0 | AAAGGAGG | m7b | (m6c->m7b) | -0.167 | -0.142 | No effect | |
hsa-miR-3612 |
aagccatTGCCTCCTtgag |
0 | AGGAGGCA | m8a | Created | -0.076 | -0.158 |
-0.03 |
|
hsa-miR-4428 |
aagccattgTCTCCTTGag |
0 | CAAGGAGA | m8a | (m8a->m7b) | 0.106 | 0.023 | No effect | |
hsa-miR-4695-5p |
aagccattGCCTCCTtgag |
0 | CAGGAGGC | m7b | Created | -0.328 | -0.41 |
0.26 |
|
hsa-miR-650 |
aagccatTGCCTCCTtgag |
0 | AGGAGGCA | m8a | Created | -0.072 | -0.154 | No effect |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186856500A>G | ICGC_9AD48822-2A78-11E2-8335-12FD496BB9B8 | CPCG_0102_Pr_P_P2 | ProstateCancer(OICR,CA) | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1251 |
tgccagGCTAGAGTgcagt |
1 |
ACUCUAGC | m8a | Disrupted | 0.051 | 0.015 | No effect | |
hsa-miR-508-5p |
tgccaggCTGGAGTgcagt |
0 | UACUCCAG | m7b | Created | -0.172 | -0.07 |
-0.15 |
|
hsa-miR-5684 |
tgccaggCTAGAGTgcagt |
1 |
AACUCUAG | m7b | Disrupted | 0.053 | no TS |
1.25 |
|
hsa-miR-766-3p |
tgccagGCTGGAGTgcagt |
0 | ACUCCAGC | m8a | Created | -0.22 | -0.189 |
-1.31 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186856561T>C | ICGC_9AD48CF0-2A78-11E2-8335-12FD496BB9B8 | CPCG_0102_Pr_P_P2 | ProstateCancer(OICR,CA) | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-298 |
agcgattCTTCTGCctcag |
1 |
AGCAGAAG | m7b | Disrupted | 0.069 | no TS |
1.6 |
|
hsa-miR-4722-5p |
agcgattCTCCTGCCtcag |
0 | GGCAGGAG | m8a | Created | -0.194 | -0.187 |
-0.6 |
|
hsa-miR-4768-3p |
agcgatTCTCCTGcctcag |
0 | CCAGGAGA | m7b | Created | -0.546 | -0.471 |
-0.06 |
|
hsa-miR-940 |
agcgattctCCTGCCTcag |
0 | AAGGCAGG | m7b | (m6c->m7b) | -0.177 | -0.184 |
-0.14 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186856636A>G | COSN4913456 | CPCG_0184_Pr_P_P1 | [prostate][NS][carcinoma][adenocarcinoma] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4684-5p |
tttttaGTAGAGAcagggt |
2 |
CUCUCUAC | m7b | Created | -0.083000 | -0.077000 |
-2.480000 |
|
hsa-miR-511 |
tttttagtAAAGACAgggt |
1 |
GUGUCUUU | m7b | Disrupted | 0.100000 | no TS |
0.030000 |
|
hsa-miR-4684-5p |
tttttaGTAGAGAcagggt |
0 | CUCUCUAC | m7b | Created | -0.083 | -0.077 |
-2.48 |
|
hsa-miR-511 |
tttttagtAAAGACAgggt |
0 | GUGUCUUU | m7b | Disrupted | 0.1 | no TS |
0.03 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186856654A>G | ICGC_7449B15A-2A78-11E2-96E7-04FD496BB9B8 | CPCG_0102_Pr_P_P1 | ProstateCancer(OICR,CA) | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-5583-3p |
tttcaCCATATTggccagg |
1 |
GAAUAUGG | m7b | Disrupted | 0.144 | no TS |
0.01 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186857442T>C | COSN6758141 | RK122_C01 | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186857626C>T | COSN9539931 | AOCS-109-1-X | [ovary][NS][other][neoplasm] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1266 |
caaaagaggCCTGAGagaa |
0 | CCUCAGGG | m6b | Disrupted | -0.106000 | -0.068000 | No effect | |
hsa-miR-2682-3p |
caaAAGAGGCctgagagaa |
0 | CGCCUCUU | m7b | (m7b->m6b) | -0.143000 | -0.058000 | No effect | |
hsa-miR-4330 |
caaaagaggTCTGAGagaa |
0 | CCUCAGAU | m6b | Created | no TS | -0.031000 |
-3.080000 |
|
hsa-miR-4518 |
caaaagaggCCTGAGagaa |
0 | GCUCAGGG | m6b | Disrupted | -0.099000 | -0.061000 | No effect | |
hsa-miR-4650-5p |
caaaagAGGCCTGAgagaa |
1 |
UCAGGCCU | m8a | Disrupted | -0.221000 | no TS | No effect | |
hsa-miR-4757-5p |
caaaAGAGGCCTgagagaa |
0 | AGGCCUCU | m8a | Disrupted | -0.272000 | -0.113000 |
-0.200000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186857630A>G | COSN7628566 | PCSI_0048_Pa_P_526 | [pancreas][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-1266 |
agaggCCTGAGagaaactg |
0 | CCUCAGGG | m6b | Disrupted | -0.106000 | -0.068000 | No effect | |
hsa-miR-150-5p |
agaggccTGGGAGAaactg |
0 | UCUCCCAA | m7a | Created | no TS | -0.045000 |
-2.770000 |
|
hsa-miR-1915-3p |
agaggCCTGGGagaaactg |
0 | CCCCAGGG | m6b | Created | no TS | -0.077000 | No effect | |
hsa-miR-2116-3p |
agaggccTGGGAGaaactg |
0 | CCUCCCAU | m6b | Created | no TS | -0.060000 |
-2.960000 |
|
hsa-miR-4518 |
agaggCCTGAGagaaactg |
0 | GCUCAGGG | m6b | Disrupted | -0.099000 | -0.061000 | No effect | |
hsa-miR-4650-5p |
agAGGCCTGAgagaaactg |
1 |
UCAGGCCU | m8a | (m8a->m7a) | -0.221000 | -0.091000 |
-0.020000 |
|
hsa-miR-4713-5p |
agaggccTGGGAGAAactg |
0 | UUCUCCCA | m8a | Created | no TS | -0.121000 |
-0.820000 |
|
hsa-miR-4726-3p |
agaggCCTGGGagaaactg |
0 | ACCCAGGU | m6b | Created | no TS | -0.094000 |
-2.450000 |
|
hsa-miR-4768-5p |
agaggcctGAGAGAAactg |
2 |
AUUCUCUC | m7b | Disrupted | -0.014000 | 0.021000 | No effect | |
hsa-miR-532-3p |
agaggccTGGGAGaaactg |
0 | CCUCCCAC | m6b | Created | no TS | -0.055000 |
-4.240000 |
|
hsa-miR-629-3p |
agaggcctGGGAGAAactg |
0 | GUUCUCCC | m7b | Created | no TS | -0.107000 |
-1.970000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186858011G>A | COSN6573293 | ICGC_MB60 | [central_nervous_system][brain][primitive_neuroectodermal_tumour-medulloblastoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4712-3p |
cagaCTCTCATTctgtggc |
0 | AAUGAGAG | m8a | Created | no TS | -0.128000 |
-0.020000 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||||||
---|---|---|---|---|---|---|---|---|---|
chr3:g.186858250A>G | COSN5041832 | HX21T | [liver][NS][carcinoma][NS] | ||||||
miRNA Targets Table | |||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change | |
hsa-miR-4284 |
attacaggcGTGAGCCatc |
1 |
GGGCUCAC | m7b | (m6c->m7b) | -0.131000 | -0.343000 | No effect | |
hsa-miR-532-5p |
attacAGGCATGagccatc |
0 | CAUGCCUU | m7a | Disrupted | NA | NA |
0.080000 |
Mutation | Mutation ID | Sample Name | Cancer Type | |||||
---|---|---|---|---|---|---|---|---|
chr3:g.186858452T>C | COSN1936780 | RK029_C01 | [liver][NS][carcinoma][NS] | |||||
miRNA Targets Table | ||||||||
miR ID | miRSite | Conservation | miRSeed | SeedClass | FuncClass | Wildtype CS+ | Mutant CS+ | PITA score change |
hsa-miR-3065-5p |
taataaaaTTGTTGAattt |
0 | UCAACAAA | m7a | Disrupted | -0.014000 | 0.113000 |
0.190000 |
hsa-miR-421 |
taataaaatTGTTGAattt |
0 | AUCAACAG | m6b | Disrupted | -0.177000 | no TS |
3.450000 |
hsa-miR-590-3p |
taaTAAAATTgttgaattt |
2 |
UAAUUUUA | m7b | (m7b->m6b) | 0.055000 | 0.165000 | No effect |
hsa-miR-3065-5p |
taataaaaTTGTTGAattt |
0 | UCAACAAA | m7a | Disrupted | -0.014000 | 0.113000 |
0.190000 |
hsa-miR-421 |
taataaaatTGTTGAattt |
0 | AUCAACAG | m6b | Disrupted | -0.177000 | no TS |
3.450000 |
hsa-miR-590-3p |
taaTAAAATTgttgaattt |
2 |
UAAUUUUA | m7b | (m7b->m6b) | 0.055000 | 0.165000 | No effect |
hsa-miR-3065-5p |
taataaaaTTGTTGAattt |
0 | UCAACAAA | m7a | Disrupted | -0.014 | 0.113 |
0.19 |
hsa-miR-421 |
taataaaatTGTTGAattt |
0 | AUCAACAG | m6b | Disrupted | -0.177 | no TS |
3.45 |
hsa-miR-590-3p |
taaTAAAATTgttgaattt |
2 |
UAAUUUUA | m7b | (m7b->m6b) | 0.055 | 0.165 | No effect |
Location | SNP ID | Ancestral Allele |
Allele | miR ID | Conservation | miRSite | FuncClass | Validation | context+ score change |
---|---|---|---|---|---|---|---|---|---|
186854740 | rs201402829 | G | G |
hsa-miR-1227-5p hsa-miR-185-3p hsa-miR-4260 hsa-miR-4283 hsa-miR-4489 hsa-miR-4675 hsa-miR-4687-3p hsa-miR-4741 |
2 2 2 2 2 4 3 4 |
caaacaGCCCCAA caaaCAGCCCCAa caaacaGCCCCAA caaacAGCCCCAa caaacAGCCCCAa caaACAGCCCcaa caAACAGCCccaa caaACAGCCCcaa |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N N |
-0.219 -0.544 -0.297 -0.222 -0.235 -0.257 -0.175 -0.267 |
C |
hsa-miR-1275 hsa-miR-4665-5p hsa-miR-609 hsa-miR-6747-5p hsa-miR-6751-5p hsa-miR-6752-5p hsa-miR-6803-5p hsa-miR-6835-5p hsa-miR-6842-5p hsa-miR-7109-5p hsa-miR-7110-5p |
2 2 3 4 2 2 2 2 2 2 2 |
caaacaCCCCCAA caaacaCCCCCAA caAACACCCccaa caaACACCCCcaa caaacACCCCCAA caaaCACCCCCAa caaacACCCCCAA caaacACCCCCAa caaaCACCCCCAa caaacaCCCCCAA caaaCACCCCCAa |
Created Created Created Created Created Created Created Created Created Created Created |
N N N N N N N N N N N |
-0.202 -0.199 -0.177 -0.283 -0.496 -0.568 -0.475 -0.249 -0.547 -0.21 -0.547 |
|||
186854793 | rs188947568 | A | A |
hsa-miR-5692a |
2 |
TTATTTAgttgga |
Disrupted |
N |
-0.016 |
T |
hsa-miR-3065-5p |
7 |
ttatTTTGTTGga |
Created |
N |
-0.122 |
|||
186854973 | rs199943987 | G | G |
hsa-miR-4433-3p hsa-miR-4459 hsa-miR-4711-5p hsa-miR-4768-3p |
3 3 4 3 |
tCTCCTGAtgctc tCTCCTGAtgctc tctcCTGATGCtc TCTCCTGAtgctc |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.114 -0.084 -0.18 -0.25 |
T |
hsa-miR-3173-3p hsa-miR-4428 hsa-miR-6891-5p |
3 3 3 |
tCTCCTTAtgctc TCTCCTTAtgctc tCTCCTTAtgctc |
Created Created Created |
N N N |
-0.081 -0.226 -0.071 |
|||
186854974 | rs184535507 | A | A |
hsa-miR-4433-3p hsa-miR-4459 hsa-miR-4711-5p hsa-miR-4768-3p |
3 3 1 3 |
CTCCTGAtgctca CTCCTGAtgctca ctcCTGATGCtca CTCCTGAtgctca |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.114 -0.084 -0.18 -0.122 |
186855540 | rs189760873 | C | C |
hsa-miR-3173-3p hsa-miR-4434 hsa-miR-4516 hsa-miR-4695-5p hsa-miR-5703 hsa-miR-6770-5p hsa-miR-6891-5p |
2 4 4 2 5 5 2 |
agCCTCCTTctcc agcctcCTTCTCC agcctcCTTCTCC aGCCTCCTtctcc agcctcCTTCTCC agcctCCTTCTCc agCCTCCTTctcc |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N |
-0.003 0.02 0.02 -0.11 0.02 -0.028 -0.041 |
T |
hsa-miR-583 |
2 |
agCCTCTTTctcc |
Created |
N |
0.063 |
|||
186855579 | rs200960156 | T | C |
hsa-miR-6746-5p hsa-miR-6771-5p |
1 1 |
gcCTCCCGAgtag gcCTCCCGAgtag |
Created Created |
N N |
-0.12 -0.126 |
T |
hsa-miR-3664-3p hsa-miR-4433-3p hsa-miR-4459 hsa-miR-4695-5p hsa-miR-4768-3p hsa-miR-510-5p hsa-miR-512-5p |
1 1 1 1 1 1 1 |
gccTCCTGAGtag gcCTCCTGAgtag gCCTCCTGAgtag GCCTCCTgagtag gcCTCCTGAgtag gcctCCTGAGTAg gcctcCTGAGTAg |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N |
-0.017 -0.017 -0.14 -0.132 -0.014 -0.166 -0.018 |
|||
186855641 | rs202034095 | A | |||||||
G |
hsa-miR-3675-3p hsa-miR-4684-5p |
2 2 |
agTAGAGATgggg aGTAGAGAtgggg |
Created Created |
N N |
0.029 -0.073 |
|||
186855700 | rs201119230 | C | C |
hsa-miR-363-5p hsa-miR-3656 hsa-miR-6087 hsa-miR-6745 |
2 1 1 2 |
TCCACCCgcctcg tcCACCCGCctcg tccacCCGCCTCg TCCACCCgcctcg |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.048 -0.123 -0.086 -0.048 |
T |
hsa-miR-1827 hsa-miR-3665 hsa-miR-4736 hsa-miR-6808-5p hsa-miR-6893-5p hsa-miR-940 |
1 1 1 1 1 1 |
tccacCTGCCTCg tcCACCTGCctcg tccACCTGCCtcg tccaCCTGCCTcg tccaCCTGCCTcg tccaCCTGCCTcg |
Created Created Created Created Created Created |
N N N N N N |
No Change -0.033 -0.016 -0.033 -0.024 -0.024 |
|||
186855734 | rs6414520 | G | A |
hsa-miR-214-5p hsa-miR-6514-3p hsa-miR-6811-3p hsa-miR-6847-3p |
0 |
ACAGGCAtgagcc ACAGGCAtgagcc ACAGGCAtgagcc acaggCATGAGCc |
Created Created Created Created |
N N N N |
-0.047 -0.086 -0.047 -0.027 |
G |
hsa-miR-4284 |
0 |
acaggcGTGAGCC |
Disrupted |
N |
-0.083 |
|||
186855914 | rs185270715 | C | C |
hsa-miR-5089-5p hsa-miR-6871-5p |
4 3 |
tgAATCCCAtatc tgaaTCCCATAtc |
Disrupted Disrupted |
N N |
-0.019 -0.034 |
T |
hsa-miR-4712-3p hsa-miR-5186 |
3 4 |
tgaaTCTCATAtc tgAATCTCAtatc |
Created Created |
N N |
0.024 0.011 |
|||
186856157 | rs199944090 | C | C |
hsa-miR-4428 |
1 |
cattgTCTCCTTg |
Disrupted |
N |
0.083 |
T |
hsa-miR-4261 hsa-miR-4496 hsa-miR-651-3p hsa-miR-6830-5p |
1 1 1 5 |
catTGTTTCCttg cattGTTTCCTtg cattgTTTCCTTg cattgtTTCCTTG |
Created Created Created Created |
N N N N |
0.032 0.028 0.158 0.002 |
|||
186856163 | rs111856964 | G | G |
hsa-miR-561-5p hsa-miR-6830-5p hsa-miR-888-5p |
4 4 4 |
cTCCTTGAgtacc cTCCTTGAgtacc ctccTTGAGTAcc |
Disrupted Disrupted Disrupted |
N N N |
0.068 0.044 0.108 |
A |
hsa-miR-3173-3p hsa-miR-4428 hsa-miR-4477b hsa-miR-6891-5p |
4 4 4 4 |
CTCCTTAagtacc CTCCTTAagtacc cTCCTTAAgtacc CTCCTTAagtacc |
Created Created Created Created |
N N N N |
0.05 -0.005 0.118 0.054 |
|||
186856191 | rs201773400 | G | G |
hsa-miR-4695-5p hsa-miR-5008-5p |
4 4 |
gactggGCCTCCT gactGGGCCTCct |
Disrupted Disrupted |
N N |
-0.02 -0.095 |
T |
hsa-miR-4751 hsa-miR-7154-3p |
4 4 |
gactGGTCCTCct gactgGTCCTCCt |
Created Created |
N N |
-0.097 -0.037 |
|||
186856559 | rs201817952 | C | C |
hsa-miR-298 |
1 |
gcgattCTTCTGC |
Disrupted |
N |
0.069 |
G |
hsa-miR-589-3p |
1 |
gcgatTGTTCTGc |
Created |
N |
0.115 |
|||
186856636 | rs201347029 | A | A |
hsa-miR-511-5p hsa-miR-6830-3p |
1 1 |
ttagtAAAGACAg ttagtAAAGACAg |
Disrupted Disrupted |
N N |
0.1 0.114 |
G |
hsa-miR-4684-5p hsa-miR-593-3p hsa-miR-6818-3p hsa-miR-6895-3p |
1 1 1 1 |
ttaGTAGAGAcag ttagtAGAGACAg ttagtAGAGACAg ttagtAGAGACAg |
Created Created Created Created |
N N N N |
0.006 0.055 0.034 0.051 |
|||
186856697 | rs4686804 | G | G |
hsa-miR-3612 hsa-miR-4443 hsa-miR-6087 hsa-miR-650 hsa-miR-7112-5p |
2 2 1 2 0 |
ctgcccGCCTCCA ctgcccGCCTCCA ctgcCCGCCTCca ctgcccGCCTCCA CTGCCCGcctcca |
Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N |
-0.048 -0.039 -0.079 -0.044 -0.102 |
A |
hsa-miR-3689d hsa-miR-541-3p hsa-miR-6134 hsa-miR-654-5p hsa-miR-6721-5p hsa-miR-6851-5p |
2 0 1 0 0 2 |
ctgccCACCTCCA ctGCCCACCtcca ctgcCCACCTCca ctGCCCACCtcca CTGCCCAcctcca ctgccCACCTCCA |
Created Created Created Created Created Created |
N N N N N N |
-0.093 -0.112 -0.02 -0.112 -0.003 -0.051 |
|||
186856990 | rs200698610 | C | C |
hsa-miR-6125 hsa-miR-6850-5p |
1 2 |
gCCTTCCGcagtg gccTTCCGCAgtg |
Disrupted Disrupted |
N N |
-0.04 -0.034 |
T |
hsa-miR-298 hsa-miR-3158-5p hsa-miR-4418 hsa-miR-509-3-5p hsa-miR-509-5p |
2 2 1 1 1 |
gcCTTCTGCAgtg gcctTCTGCAGtg gccttCTGCAGTg gccttCTGCAGTg gccttCTGCAGTg |
Created Created Created Created Created |
N N N N N |
0.09 0.015 -0.016 -0.035 -0.016 |
|||
186857046 | rs200710189 | T | C |
hsa-miR-149-3p hsa-miR-4728-5p hsa-miR-6746-5p hsa-miR-6771-5p hsa-miR-6785-5p hsa-miR-6883-5p |
0 |
CCCTCCCgatatc CCCTCCCgatatc ccCTCCCGAtatc ccCTCCCGAtatc CCCTCCCgatatc CCCTCCCgatatc |
Created Created Created Created Created Created |
N N N N N N |
-0.081 -0.081 -0.086 -0.077 -0.081 -0.09 |
T |
hsa-miR-144-5p hsa-miR-3074-3p hsa-miR-4433-3p hsa-miR-4459 hsa-miR-4768-3p hsa-miR-4779 |
1 0 0 0 0 0 |
ccctccTGATATC ccctcCTGATATc ccCTCCTGAtatc cCCTCCTGAtatc ccCTCCTGAtatc CCCTCCTgatatc |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N |
0.013 0.11 0.014 -0.045 0.014 -0.083 |
|||
186857080 | rs200026218 | G | |||||||
A |
hsa-miR-3201 hsa-miR-4712-3p hsa-miR-4791 |
1 1 1 |
gctctCATATCCc gCTCTCATAtccc gctctCATATCCc |
Created Created Created |
N N N |
0.062 0.092 0.034 |
|||
186857522 | rs200335620 | C | C |
hsa-miR-3173-3p hsa-miR-4428 hsa-miR-6891-5p |
0 |
ggtgggCTCCTTA ggtgggCTCCTTA ggtgggCTCCTTA |
Disrupted Disrupted Disrupted |
N N N |
0.029 0.023 0.036 |
T |
hsa-miR-3914 hsa-miR-651-3p |
2 2 |
ggtgGGTTCCTta ggtgggTTCCTTA |
Created Created |
N N |
-0.065 0.09 |
|||
186857527 | rs201012021 | C | T |
hsa-miR-3173-3p hsa-miR-3607-3p hsa-miR-3686 hsa-miR-4428 hsa-miR-6891-5p |
0 |
gCTCCTTAcagaa gctccTTACAGAa gctccTTACAGAA gCTCCTTAcagaa gCTCCTTAcagaa |
Created Created Created Created Created |
N N N N N |
0.029 0.072 0.089 0.023 0.036 |
C |
hsa-miR-1294 hsa-miR-3150b-3p hsa-miR-4316 hsa-miR-4677-3p hsa-miR-4679 hsa-miR-4689 hsa-miR-4784 hsa-miR-6858-5p |
0 |
gctCCTCACAgaa gCTCCTCAcagaa gctCCTCACAgaa gctcCTCACAGAa gctccTCACAGAa gCTCCTCAcagaa gCTCCTCAcagaa gCTCCTCAcagaa |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N N |
-0.023 -0.003 -0.021 -0.039 0.01 0.02 -0.01 0.011 |
|||
186857626 | rs201474196 | C | C |
hsa-miR-1266-5p hsa-miR-1972 hsa-miR-2682-3p hsa-miR-3664-3p hsa-miR-4518 hsa-miR-4650-5p hsa-miR-4757-5p hsa-miR-6744-3p hsa-miR-6781-3p |
6 1 0 6 6 1 0 0 0 |
aagaggCCTGAGA aagaGGCCTGAga AAGAGGCctgaga aagaggCCTGAGA aagaggCCTGAGA aagAGGCCTGAga aAGAGGCCtgaga aAGAGGCCtgaga AAGAGGCctgaga |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N N N |
-0.038 -0.099 -0.085 -0.029 -0.038 -0.221 -0.159 -0.159 -0.123 |
T |
hsa-miR-4330 hsa-miR-6821-3p |
6 0 |
aagaggTCTGAGA aAGAGGTCtgaga |
Created Created |
N N |
-0.031 -0.128 |
|||
186857632 | rs78177548 | A | A |
hsa-miR-1266-5p hsa-miR-3664-3p hsa-miR-4518 hsa-miR-4768-5p hsa-miR-6809-3p hsa-miR-6833-3p hsa-miR-6873-3p |
6 6 6 4 4 4 5 |
CCTGAGAgaaact CCTGAGAgaaact CCTGAGAgaaact cctGAGAGAAAct cctgAGAGAAAct cctGAGAGAAAct cctGAGAGAAact |
Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted Disrupted |
N N N N N N N |
-0.038 -0.029 -0.038 -0.035 0.048 -0.056 -0.009 |
G |
hsa-miR-4446-5p hsa-miR-4755-5p hsa-miR-5006-3p hsa-miR-642a-5p |
4 4 4 5 |
cctgAGGGAAAct cctgAGGGAAAct cctgAGGGAAAct cctGAGGGAAact |
Created Created Created Created |
N N N N |
0.016 -0.02 -0.013 -0.054 |
|||
186858250 | rs34422369 | A | A |
hsa-miR-214-5p hsa-miR-6514-3p hsa-miR-6811-3p hsa-miR-6847-3p |
2 2 2 2 |
ACAGGCAtgagcc ACAGGCAtgagcc ACAGGCAtgagcc acaggCATGAGCc |
Disrupted Disrupted Disrupted Disrupted |
N N N N |
-0.141 -0.209 -0.141 -0.162 |
G |
hsa-miR-4284 |
2 |
acaggcGTGAGCC |
Created |
N |
-0.212 |
|||
186858254 | rs187638504 | G | G |
hsa-miR-24-3p hsa-miR-4284 hsa-miR-6847-3p |
1 1 1 |
gcaTGAGCCAtca gcaTGAGCCAtca gCATGAGCcatca |
Disrupted Disrupted Disrupted |
N N N |
-0.108 -0.119 -0.162 |
A |
hsa-miR-1206 hsa-miR-218-2-3p hsa-miR-8069 |
1 1 1 |
gCATGAACcatca gcatGAACCATca gcatgAACCATCA |
Created Created Created |
N N N |
-0.1 -0.136 -0.254 |