SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Browse genes associated with cancer risk that contain miRNA related somatic mutations

Somatic mutations that alter miRNA target sites: CLASH [5 records found]

[download data table]

Transcript ID	Gene Symbol	Mutation ID
NR_024040	CSGALNACT1	chr8:g.19505766C>T
NR_024040	CSGALNACT1	chr8:g.19505766C>A
NR_024040	CSGALNACT1	chr8:g.19505772C>T
NR_024040	CSGALNACT1	chr8:g.19505792G>T
NR_024040	CSGALNACT1	chr8:g.19505794G>A

Somatic mutations that alter miRNA target sites: PAR-CLIP and HITS-CLIP [16 records found]

[download data table]

Transcript ID	Gene Symbol	Mutation ID
NM_018371	CSGALNACT1	chr8:g.19404210G>T
NM_018371	CSGALNACT1	chr8:g.19405492C>T
NM_018371	CSGALNACT1	chr8:g.19405744T>G
NM_018371	CSGALNACT1	chr8:g.19405817G>C
NM_018371	CSGALNACT1	chr8:g.19408650G>A
NM_018371	CSGALNACT1	chr8:g.19408652G>A
NM_018371	CSGALNACT1	chr8:g.19408679A>G
hsa_circ_0083490	CSGALNACT1	chr8:g.19420363C>T
hsa_circ_0083490	CSGALNACT1	chr8:g.19420392C>T
hsa_circ_0083490	CSGALNACT1	chr8:g.19420398T>A
NM_018371	CSGALNACT1	chr8:g.19505257G>A
NM_018371	CSGALNACT1	chr8:g.19505268G>T
NM_018371	CSGALNACT1	chr8:g.19505275C>G
NM_018371	CSGALNACT1	chr8:g.19505390G>A
NM_018371	CSGALNACT1	chr8:g.19505792G>T
NM_018371	CSGALNACT1	chr8:g.19505794G>A

Somatic mutations that alter predicted mRNA-miRNA target sites [12 records found]

[download data table]

Transcript ID	Gene Symbol	Mutation ID
NM_001130518	CSGALNACT1	chr8:g.19404905A>C
NM_018371	CSGALNACT1	chr8:g.19404905A>C
NM_001130518	CSGALNACT1	chr8:g.19404590T>A
NM_018371	CSGALNACT1	chr8:g.19404590T>A
NM_001130518	CSGALNACT1	chr8:g.19405744T>G
NM_018371	CSGALNACT1	chr8:g.19405744T>G
NM_001130518	CSGALNACT1	chr8:g.19405492C>T
NM_018371	CSGALNACT1	chr8:g.19405492C>T
NM_001130518	CSGALNACT1	chr8:g.19404607T>A
NM_018371	CSGALNACT1	chr8:g.19404607T>A
NM_001130518	CSGALNACT1	chr8:g.19404210G>T
NM_018371	CSGALNACT1	chr8:g.19404210G>T