SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Molecule Type: mRNA
Transcript ID: NM_000321
Gene Symbol: RB1
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr13:g.48480150A>T COSN9086040 8051723 [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-99a L1-349815_2 chr13:48480139-48480186 +
miR-100 L1HS-757127_2 chr13:48480139-48480209 +

Mutation Mutation ID Sample Name Cancer Type
chr13:g.48362898GAA>G COSM219064 1655932 [pancreas][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-426388_4 chr13:48362865-48362909 +

Mutation Mutation ID Sample Name Cancer Type
chr13:g.48362892CA>C COSM1745421 B96 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-426388_4 chr13:48362865-48362909 +

Mutation Mutation ID Sample Name Cancer Type
chr13:g.48362892C>T COSM4806229 CHC909T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-426388_4 chr13:48362865-48362909 +

Mutation Mutation ID Sample Name Cancer Type
chr13:g.48362887C>T COSM117278 TCGA-09-1665-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-426388_4 chr13:48362865-48362909 +

Mutation Mutation ID Sample Name Cancer Type
chr13:g.48362882G>A COSM190050 TCGA-AA-3984-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-426388_4 chr13:48362865-48362909 +

Mutation Mutation ID Sample Name Cancer Type
chr13:g.48362881G>A COSM1367191 TCGA-AZ-6601-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-426388_4 chr13:48362865-48362909 +

Mutation Mutation ID Sample Name Cancer Type
chr13:g.48362880CG>C COSM318399 631092 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-426388_4 chr13:48362865-48362909 +

Mutation Mutation ID Sample Name Cancer Type
chr13:g.48362868AA>A COSM873 S82072 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-426388_4 chr13:48362865-48362909 +

Mutation Mutation ID Sample Name Cancer Type
chr13:g.48362866A>G COSM363247 LUAD-D02085 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-426388_4 chr13:48362865-48362909 +

Mutation Mutation ID Sample Name Cancer Type
chr13:g.48362865C>T COSM3469148 TCGA-EE-A29B-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID CLASH Sequence ID Target Site Strand
miR-149 L2HS-426388_4 chr13:48362865-48362909 +



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