SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_201348
Gene Symbol: PRELP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.203486808G>A COSM4520782 CSCC-32-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-335-3p ctggATGAAAActac UUUUUCAU m7b Created HPRO7_150_G238.1_203455939

Mutation Mutation ID Sample Name Cancer Type
chr1:g.203486807G>A COSM4520775 CSCC-10-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5586-5p GCTGGATAgaaacta UAUCCAGC m8a Created HPRO7_150_G238.1_203455939

Mutation Mutation ID Sample Name Cancer Type
chr1:g.203486805A>G COSM3771596 8044103 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6720-5p cGGCTGGAtggaaac UUCCAGCC m7b Disrupted HPRO7_150_G238.1_203455939
hsa-miR-3692-3p cggctggGTGGAAac GUUCCACA m6b Created HPRO7_150_G238.1_203455939
hsa-miR-500b-3p cggCTGGGTGgaaac GCACCCAG m7b Created HPRO7_150_G238.1_203455939
hsa-miR-5586-5p cgGCTGGATggaaac UAUCCAGC m7b (m7b->m6b) HPRO7_150_G238.1_203455939
hsa-miR-6512-3p cGGCTGGAtggaaac UUCCAGCC m7b Disrupted HPRO7_150_G238.1_203455939

Mutation Mutation ID Sample Name Cancer Type
chr1:g.203486800G>A COSM209536 TCGA-AA-3864-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6849-3p acctgcGGCTGGatg ACCAGCCU m6b Disrupted HPRO7_150_G238.1_203455939
hsa-miR-6720-5p acctgcGGCTGGAtg UUCCAGCC m7b Disrupted HPRO7_150_G238.1_203455939
hsa-miR-5586-5p acctgcgGCTGGATg UAUCCAGC m7b Disrupted HPRO7_150_G238.1_203455939
hsa-miR-6512-3p acctgcGGCTGGAtg UUCCAGCC m7b Disrupted HPRO7_150_G238.1_203455939

Mutation Mutation ID Sample Name Cancer Type
chr1:g.203486799G>A COSM2213722 TCGA-BR-8284-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1205 taCCTGCAGctggat UCUGCAGG m7b (m6b->m7b) HPRO7_150_G238.1_203455939
hsa-miR-6512-3p tacctgcGGCTGGAt UUCCAGCC m7b Disrupted HPRO7_150_G238.1_203455939
hsa-miR-6720-5p tacctgcGGCTGGAt UUCCAGCC m7b Disrupted HPRO7_150_G238.1_203455939
hsa-miR-6849-3p tacctgcGGCTGGat ACCAGCCU m6b Disrupted HPRO7_150_G238.1_203455939
hsa-miR-6886-5p taCCTGCGGctggat CCCGCAGG m7b (m7b->m6b) HPRO7_150_G238.1_203455939

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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