SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_032557
Gene Symbol: USP38

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.143197890T>C COSM1757104 B110 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-497-5p aTGCTGCTtagcttt CAGCAGCA m7b Disrupted HPTA4_2899_G13228.1_144119037
hsa-miR-646 atGCTGCTTagcttt AAGCAGCU m7a (m7a->m6a) HPTA4_2899_G13228.1_144119037
hsa-miR-6511a-5p atgCTGCCTagcttt CAGGCAGA m6b Created HPTA4_2899_G13228.1_144119037
hsa-miR-6792-5p atgCTGCTTAgcttt GUAAGCAG m7b Disrupted HPTA4_2899_G13228.1_144119037
hsa-miR-6808-5p atgCTGCCTagcttt CAGGCAGG m6b Created HPTA4_2899_G13228.1_144119037
hsa-miR-6838-5p aTGCTGCTTagcttt AAGCAGCA m8a (m8a->m7a) HPTA4_2899_G13228.1_144119037
hsa-miR-6893-5p atgCTGCCTagcttt CAGGCAGG m6b Created HPTA4_2899_G13228.1_144119037
hsa-miR-885-3p atGCTGCCTagcttt AGGCAGCG m7a (m6a->m7a) HPTA4_2899_G13228.1_144119037
hsa-miR-940 atgCTGCCTagcttt AAGGCAGG m6b Created HPTA4_2899_G13228.1_144119037
hsa-miR-107 ATGCTGCTtagcttt AGCAGCAU m8a Disrupted HPTA4_2899_G13228.1_144119037
hsa-miR-15a-5p aTGCTGCTtagcttt UAGCAGCA m7b Disrupted HPTA4_2899_G13228.1_144119037
hsa-miR-15b-5p aTGCTGCTtagcttt UAGCAGCA m7b Disrupted HPTA4_2899_G13228.1_144119037
hsa-miR-16-5p aTGCTGCTtagcttt UAGCAGCA m7b Disrupted HPTA4_2899_G13228.1_144119037
hsa-miR-1910-3p atgCTGCCTagcttt GAGGCAGA m6b Created HPTA4_2899_G13228.1_144119037
hsa-miR-195-5p aTGCTGCTtagcttt UAGCAGCA m7b Disrupted HPTA4_2899_G13228.1_144119037
hsa-miR-2682-5p atgCTGCCTagcttt CAGGCAGU m6b Created HPTA4_2899_G13228.1_144119037
hsa-miR-103a-3p ATGCTGCTtagcttt AGCAGCAU m8a Disrupted HPTA4_2899_G13228.1_144119037
hsa-miR-424-5p aTGCTGCTtagcttt CAGCAGCA m7b Disrupted HPTA4_2899_G13228.1_144119037

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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