SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_025179
Gene Symbol: PLXNA2
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.208149715C>G COSN7199874 8057574 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-543 cttGAATGTTctctc AAACAUUC m7b Created HPTA4_354_G1626.1_208323061
hsa-miR-4699-5p cttgAATCTTCTctc AGAAGAUU m8a Disrupted HPTA4_354_G1626.1_208323061
hsa-miR-4262 ctTGAATGTtctctc GACAUUCA m7b (m6b->m7b) HPTA4_354_G1626.1_208323061
hsa-miR-3925-5p cttgaatGTTCTCTc AAGAGAAC m7b Created HPTA4_354_G1626.1_208323061
hsa-miR-181d-5p ctTGAATGTTctctc AACAUUCA m8a Created HPTA4_354_G1626.1_208323061
hsa-miR-181c-5p ctTGAATGTTctctc AACAUUCA m8a Created HPTA4_354_G1626.1_208323061
hsa-miR-181b-5p ctTGAATGTTctctc AACAUUCA m8a Created HPTA4_354_G1626.1_208323061
hsa-miR-181a-5p ctTGAATGTTctctc AACAUUCA m8a Created HPTA4_354_G1626.1_208323061
hsa-miR-1253 cttgaaTCTTCTCTc AGAGAAGA m8a Disrupted HPTA4_354_G1626.1_208323061

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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