SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_015312
Gene Symbol: KIAA1109

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.122362190C>T COSM1050704 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-624-5p aaaagctTGGTACTg UAGUACCA m7b Created HPTA4_2885_G13165.1_123283338
hsa-miR-4523 aaaagCTCGGTactg GACCGAGA m6b Disrupted HPTA4_2885_G13165.1_123283338
hsa-miR-208a-5p AAAAGCTCggtactg GAGCUUUU m8a Disrupted HPTA4_2885_G13165.1_123283338

Mutation Mutation ID Sample Name Cancer Type
chr4:g.122362188C>A COSM1050703 TCGA-D1-A103-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-208a-5p caAAAAGCTCggtac GAGCUUUU m8a Disrupted HPTA4_2885_G13165.1_123283338
hsa-miR-4523 caaaaagCTCGGTac GACCGAGA m6b Disrupted HPTA4_2885_G13165.1_123283338
hsa-miR-208b-5p caAAAAGCTcggtac AAGCUUUU m7b (m7b->m6b) HPTA4_2885_G13165.1_123283338

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser