SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_015111
Gene Symbol: N4BP3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.178119826C>T COSM3854080 TCGA-HU-A4GQ-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-922 agcCTGCTGactatg GCAGCAGA m6b Created HPTA4_3158_G14347.1_177546837
hsa-miR-761 agCCTGCTGactatg GCAGCAGG m7b (m6b->m7b) HPTA4_3158_G14347.1_177546837
hsa-miR-6510-5p agCCTGCTGactatg CAGCAGGG m7a (m6a->m7a) HPTA4_3158_G14347.1_177546837
hsa-miR-6165 agCCTGCTGactatg CAGCAGGA m7a (m6a->m7a) HPTA4_3158_G14347.1_177546837
hsa-miR-4291 agcCTGCTGActatg UUCAGCAG m7b Created HPTA4_3158_G14347.1_177546837
hsa-miR-3619-5p agCCTGCTGActatg UCAGCAGG m8a Created HPTA4_3158_G14347.1_177546837
hsa-miR-214-3p agCCTGCTGactatg ACAGCAGG m7b (m6b->m7b) HPTA4_3158_G14347.1_177546837

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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