SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_006813
Gene Symbol: PNRC1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.89083893T>A COSM1082420 TCGA-AX-A05S-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6885-3p tcacctcAGCAAAaa CUUUGCUU m6b Created HPTA4_3413_G15246.1_89793603
hsa-miR-557 tcacctcTGCAAAaa GUUUGCAC m6b Disrupted HPTA4_3413_G15246.1_89793603
hsa-miR-628-5p tcaccTCAGCAaaaa AUGCUGAC m6b Created HPTA4_3413_G15246.1_89793603
hsa-miR-6516-5p tcacctCTGCAAAaa UUUGCAGU m7a Disrupted HPTA4_3413_G15246.1_89793603
hsa-miR-507 tcacctcTGCAAAAa UUUUGCAC m7a Disrupted HPTA4_3413_G15246.1_89793603
hsa-miR-7160-5p tcaCCTCAGCAaaaa UGCUGAGG m8a Created HPTA4_3413_G15246.1_89793603
hsa-miR-7162-3p tcACCTCAGcaaaaa UCUGAGGU m7b (m6b->m7b) HPTA4_3413_G15246.1_89793603
hsa-miR-7854-3p TCACCTCAgcaaaaa UGAGGUGA m8a Created HPTA4_3413_G15246.1_89793603
hsa-miR-8077 tcacCTCAGCaaaaa GGCUGAGU m6b Created HPTA4_3413_G15246.1_89793603
hsa-miR-3680-3p tcacctcTGCAAAAa UUUUGCAU m7a Disrupted HPTA4_3413_G15246.1_89793603
hsa-miR-1273h-3p tcaccTCTGCAaaaa CUGCAGAC m6b Disrupted HPTA4_3413_G15246.1_89793603
hsa-miR-2467-3p tcaCCTCTGCaaaaa AGCAGAGG m7b Disrupted HPTA4_3413_G15246.1_89793603
hsa-miR-3678-3p tcacCTCTGCAaaaa CUGCAGAG m7b Disrupted HPTA4_3413_G15246.1_89793603
hsa-miR-4257 tcACCTCTGcaaaaa CCAGAGGU m7b (m7b->m6b) HPTA4_3413_G15246.1_89793603
hsa-miR-450b-5p tcacctcTGCAAAAa UUUUGCAA m7a Disrupted HPTA4_3413_G15246.1_89793603
hsa-miR-4663 tcacCTCAGCaaaaa AGCUGAGC m6b Created HPTA4_3413_G15246.1_89793603

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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