SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_005924
Gene Symbol: MEOX2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr7:g.15685961C>T COSM3832420 TCGA-E2-A1LE-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4652-5p ccgtAGTCCCCcggc AGGGGACU m7b Disrupted HPTA4_3585_G16061.1_15725586
hsa-miR-4471 ccgtAGTTCCCcggc UGGGAACU m7b Created HPTA4_3585_G16061.1_15725586
hsa-miR-8059 ccgtAGTTCCCCggc GGGGAACU m8a Created HPTA4_3585_G16061.1_15725586

Mutation Mutation ID Sample Name Cancer Type
chr7:g.15685957T>C COSM745703 TCGA-22-4613-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1288-3p gcggccGCAGTCCcc UGGACUGC m7b Created HPTA4_3585_G16061.1_15725586
hsa-miR-1199-3p gCGGCCGCAgtcccc UGCGGCCG m8a (m7a->m8a) HPTA4_3585_G16061.1_15725586
hsa-miR-3199 gcggccgCAGTCCCc AGGGACUG m7b Created HPTA4_3585_G16061.1_15725586
hsa-miR-8052 gcggccgCAGTCCCc CGGGACUG m7b Created HPTA4_3585_G16061.1_15725586

Mutation Mutation ID Sample Name Cancer Type
chr7:g.15685956G>T COSM1549024 TCGA-44-7670-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4753-5p ggcGGCCTTagtccc CAAGGCCA m6b Created HPTA4_3585_G16061.1_15725586

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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