SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_005780
Gene Symbol: LHFP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.39601166T>C COSM3813798 TCGA-A2-A3Y0-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-651-3p tgtcTTTCCTTTgtg AAAGGAAA m8a Created HPTA4_1066_G4811.1_40175296

Mutation Mutation ID Sample Name Cancer Type
chr13:g.39601161G>T COSM1514193 TCGA-95-7043-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-545-3p tttcttTTTGCTGcc UCAGCAAA m7b Created HPTA4_1066_G4811.1_40175296
hsa-miR-548p tttctTTTTGCTgcc UAGCAAAA m7b Created HPTA4_1066_G4811.1_40175296

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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