SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_004396
Gene Symbol: DDX5
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.64500165T>C COSM1385295 TCGA-G4-6304-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-5p tggTGTTTACAgtgc UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30b-5p tggTGTTTACAgtgc UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30c-5p tggTGTTTACAgtgc UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30d-5p tggTGTTTACAgtgc UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30e-5p tggTGTTTACAgtgc UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-3591-3p TGGTGTTTacagtgc AAACACCA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-3607-3p tggtgTTTACAGTgc ACUGUAAA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30a-5p tggTGTTTACAgtgc UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30b-5p tggTGTTTACAgtgc UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30c-5p tggTGTTTACAgtgc UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30d-5p tggTGTTTACAgtgc UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30e-5p tggTGTTTACAgtgc UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-3591-3p TGGTGTTTacagtgc AAACACCA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-3607-3p tggtgTTTACAGTgc ACUGUAAA m8a Disrupted HPTA4_1728_G7621.1_62496278

Mutation Mutation ID Sample Name Cancer Type
chr17:g.64500164A>G COSM25348 NCI-H128 [lung][NS][carcinoma][small_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-30a-5p ggTGTTTACAgtgct UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30b-5p ggTGTTTACAgtgct UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30c-5p ggTGTTTACAgtgct UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30d-5p ggTGTTTACAgtgct UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30e-5p ggTGTTTACAgtgct UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-3607-3p ggtgTTTACAGTgct ACUGUAAA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30a-5p ggTGTTTACAgtgct UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30b-5p ggTGTTTACAgtgct UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30c-5p ggTGTTTACAgtgct UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30d-5p ggTGTTTACAgtgct UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-30e-5p ggTGTTTACAgtgct UGUAAACA m8a Disrupted HPTA4_1728_G7621.1_62496278
hsa-miR-3607-3p ggtgTTTACAGTgct ACUGUAAA m8a Disrupted HPTA4_1728_G7621.1_62496278

Mutation Mutation ID Sample Name Cancer Type
chr17:g.64500150T>C COSM982900 TCGA-BS-A0TJ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3650 tgcaaatCACACCaa AGGUGUGU m6b Created HPTA4_1728_G7621.1_62496278
hsa-miR-8070 tgcaAATCACAccaa AUGUGAUU m7b Created HPTA4_1728_G7621.1_62496278
hsa-miR-3650 tgcaaatCACACCaa AGGUGUGU m6b Created HPTA4_1728_G7621.1_62496278
hsa-miR-8070 tgcaAATCACAccaa AUGUGAUU m7b Created HPTA4_1728_G7621.1_62496278

Mutation Mutation ID Sample Name Cancer Type
chr17:g.64500147CA>A COSM437150 TCGA-BH-A0BM-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4775 cAAATTAAccaatgg UUAAUUUU m7a Created HPTA4_1728_G7621.1_62496278
hsa-miR-487a-5p caaatTAACCAatgg GUGGUUAU m6b Created HPTA4_1728_G7621.1_62496278
hsa-miR-487b-5p caaatTAACCAatgg GUGGUUAU m6b Created HPTA4_1728_G7621.1_62496278
hsa-miR-659-3p caaattAACCAAtgg CUUGGUUC m6b Created HPTA4_1728_G7621.1_62496278
hsa-miR-4775 cAAATTAAccaatgg UUAAUUUU m7a Created HPTA4_1728_G7621.1_62496278
hsa-miR-487a-5p caaatTAACCAatgg GUGGUUAU m6b Created HPTA4_1728_G7621.1_62496278
hsa-miR-487b-5p caaatTAACCAatgg GUGGUUAU m6b Created HPTA4_1728_G7621.1_62496278
hsa-miR-659-3p caaattAACCAAtgg CUUGGUUC m6b Created HPTA4_1728_G7621.1_62496278

Mutation Mutation ID Sample Name Cancer Type
chr17:g.64500146C>G COSM1610628 HCC116T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1537-5p aaTTACAGCaatggg AGCUGUAA m7b (m6b->m7b) HPTA4_1728_G7621.1_62496278
hsa-miR-4718 aatTACAGCaatggg AGCUGUAC m6b Created HPTA4_1728_G7621.1_62496278
hsa-miR-4999-5p aatTACAGCAatggg UGCUGUAU m7a Created HPTA4_1728_G7621.1_62496278
hsa-miR-1537-5p aaTTACAGCaatggg AGCUGUAA m7b (m6b->m7b) HPTA4_1728_G7621.1_62496278
hsa-miR-4718 aatTACAGCaatggg AGCUGUAC m6b Created HPTA4_1728_G7621.1_62496278
hsa-miR-4999-5p aatTACAGCAatggg UGCUGUAU m7a Created HPTA4_1728_G7621.1_62496278

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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