SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_002998
Gene Symbol: SDC2
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr8:g.96609511C>T COSM1225003 587304 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3161 agtgctgCTTATCAg CUGAUAAG m7b Disrupted HPTA4_3850_G17328.1_97621733
hsa-miR-6838-5p agTGCTGCTTatcag AAGCAGCA m8a Disrupted HPTA4_3850_G17328.1_97621733
hsa-miR-6792-5p agtgCTGCTTAtcag GUAAGCAG m7b Disrupted HPTA4_3850_G17328.1_97621733
hsa-miR-646 agtGCTGCTTatcag AAGCAGCU m7a Disrupted HPTA4_3850_G17328.1_97621733
hsa-miR-497-5p agTGCTGCTtatcag CAGCAGCA m7b (m7b->m6b) HPTA4_3850_G17328.1_97621733
hsa-miR-424-5p agTGCTGCTtatcag CAGCAGCA m7b (m7b->m6b) HPTA4_3850_G17328.1_97621733
hsa-miR-383-3p AGTGCTGTttatcag ACAGCACU m8a Created HPTA4_3850_G17328.1_97621733
hsa-miR-195-5p agTGCTGCTtatcag UAGCAGCA m7b (m7b->m6b) HPTA4_3850_G17328.1_97621733
hsa-miR-16-5p agTGCTGCTtatcag UAGCAGCA m7b (m7b->m6b) HPTA4_3850_G17328.1_97621733
hsa-miR-15b-5p agTGCTGCTtatcag UAGCAGCA m7b (m7b->m6b) HPTA4_3850_G17328.1_97621733
hsa-miR-15a-5p agTGCTGCTtatcag UAGCAGCA m7b (m7b->m6b) HPTA4_3850_G17328.1_97621733

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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