SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_002471
Gene Symbol: MYH6
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr14:g.23388616G>A COSN228267 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273e ataagaCAAGCAAaa UUGCUUGA m7a Created HPTA4_1220_G5403.1_23857823
hsa-miR-200c-5p aTAAGACGagcaaaa CGUCUUAC m7a Disrupted HPTA4_1220_G5403.1_23857823
hsa-miR-3655 ataaGACAAGCaaaa GCUUGUCG m7a Created HPTA4_1220_G5403.1_23857823
hsa-miR-6885-3p ataagacAAGCAAAa CUUUGCUU m7b Created HPTA4_1220_G5403.1_23857823

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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