SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_002160
Gene Symbol: TNC
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr9:g.115086628C>T COSM3653436 TCGA-EE-A29B-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr9:g.115086626G>A COSM3926040 TCGA-ER-A3EV-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6757-3p ctttgCCAGTGTgga AACACUGG m7b Created HHHSH_3939_TNC|NM_002160|exon_CDS|-9.04998123115572|0.183615908735132
hsa-miR-3128 ctTTGCCAGtgtgga UCUGGCAA m7b (m6b->m7b) HHHSH_3939_TNC|NM_002160|exon_CDS|-9.04998123115572|0.183615908735132

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser