SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001730
Gene Symbol: KLF5
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.73062557C>T COSM3885480 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-526a gatgCTCTAGAattt CUCUAGAG m7b Created HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-518f-5p gatgCTCTAGAattt CUCUAGAG m7b Created HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-519a-5p gatgCTCTAGAattt CUCUAGAG m7b Created HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-519b-5p gatgCTCTAGAattt CUCUAGAG m7b Created HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-519c-5p gatgCTCTAGAattt CUCUAGAG m7b Created HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-520c-5p gatgCTCTAGAattt CUCUAGAG m7b Created HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-520g-5p gatgCTCTAGAattt UCUAGAGG m7a Created HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-522-5p gatgCTCTAGAattt CUCUAGAG m7b Created HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-523-5p gatgCTCTAGAattt CUCUAGAG m7b Created HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-518e-5p gatgCTCTAGAattt CUCUAGAG m7b Created HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-6081 gaTGCTCCagaattt AGGAGCAG m6b Disrupted HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-518d-5p gatgCTCTAGAattt CUCUAGAG m7b Created HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-516b-5p gatgCTCCAGAattt AUCUGGAG m7b Disrupted HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659
hsa-miR-2278 gaTGCTCTagaattt GAGAGCAG m6b Created HHKTB_676_NM_001730|1282|1321|86.6062770903606|0.541838900571659

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser