| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Transcript ID: | NM_001326 |
|---|---|
| Gene Symbol: | CSTF3 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr11:g.33096956T>G | COSM1353583 | TCGA-CA-6717-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-19a-3p | atgaaaTTTGCACgg | UGUGCAAA | m7b | Disrupted | HHHSH_869_CSTF3|NM_001326|exon_CDS|-6.34936172339579|0.920669359138616 |
| hsa-miR-19b-3p | atgaaaTTTGCACgg | UGUGCAAA | m7b | Disrupted | HHHSH_869_CSTF3|NM_001326|exon_CDS|-6.34936172339579|0.920669359138616 |
| hsa-miR-3606-3p | atGAAATTTgcacgg | AAAAUUUC | m7b | (m7b->m6b) | HHHSH_869_CSTF3|NM_001326|exon_CDS|-6.34936172339579|0.920669359138616 |
| hsa-miR-513c-3p | atGAAATTTgcacgg | UAAAUUUC | m7b | (m7b->m6b) | HHHSH_869_CSTF3|NM_001326|exon_CDS|-6.34936172339579|0.920669359138616 |
| hsa-miR-513a-3p | atGAAATTTgcacgg | UAAAUUUC | m7b | (m7b->m6b) | HHHSH_869_CSTF3|NM_001326|exon_CDS|-6.34936172339579|0.920669359138616 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr11:g.33096950G>A | COSM3727148 | WM3211 | [skin][ankle][malignant_melanoma][acral_lentiginous] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-3605-3p | tttgCACGGAGagca | CCUCCGUG | m7b | Disrupted | HHHSH_869_CSTF3|NM_001326|exon_CDS|-6.34936172339579|0.920669359138616 |
| hsa-miR-19b-3p | TTTGCACAgagagca | UGUGCAAA | m8a | Created | HHHSH_869_CSTF3|NM_001326|exon_CDS|-6.34936172339579|0.920669359138616 |
| hsa-miR-19a-3p | TTTGCACAgagagca | UGUGCAAA | m8a | Created | HHHSH_869_CSTF3|NM_001326|exon_CDS|-6.34936172339579|0.920669359138616 |
| hsa-miR-1973 | ttTGCACGGagagca | ACCGUGCA | m7b | (m7b->m6b) | HHHSH_869_CSTF3|NM_001326|exon_CDS|-6.34936172339579|0.920669359138616 |
| hsa-miR-5008-3p | tttGCACAGagagca | CCUGUGCU | m6b | Created | HHHSH_869_CSTF3|NM_001326|exon_CDS|-6.34936172339579|0.920669359138616 |
| hsa-miR-6817-3p | tttgcaCAGAGAGca | UCUCUCUG | m7b | Created | HHHSH_869_CSTF3|NM_001326|exon_CDS|-6.34936172339579|0.920669359138616 |