SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001308133
Gene Symbol: FANCM

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.45200050A>G COSN1168098 BN34T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4289 tCACAATGttaaatg GCAUUGUG m7b Created HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-543 tcacAATGTTaaatg AAACAUUC m6b Created HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-889-3p tcacaATATTAAatg UUAAUAUC m7a Disrupted HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-3143 tcacAATGTTAaatg AUAACAUU m7b Created HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-302c-5p tcacaATGTTAAAtg UUUAACAU m8a Created HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-3143 tcacAATGTTAaatg AUAACAUU m7b Created HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-4289 tCACAATGttaaatg GCAUUGUG m7b Created HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-543 tcacAATGTTaaatg AAACAUUC m6b Created HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-889-3p tcacaATATTAAatg UUAAUAUC m7a Disrupted HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-302c-5p tcacaATGTTAAAtg UUUAACAU m8a Created HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-3143 tcacAATGTTAaatg AUAACAUU m7b Created HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-4289 tCACAATGttaaatg GCAUUGUG m7b Created HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-543 tcacAATGTTaaatg AAACAUUC m6b Created HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-889-3p tcacaATATTAAatg UUAAUAUC m7a Disrupted HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682
hsa-miR-302c-5p tcacaATGTTAAAtg UUUAACAU m8a Created HHKTB_844_NM_020937|6276|6315|73.1387938107591|0.165560260578682

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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