SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001301683
Gene Symbol: SUPV3L1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.69208807C>T COSM539667 TCGA-44-2657-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6869-3p ggacaCGCGGCacca CGCCGCGC m6b Disrupted HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-1227-3p ggacacGTGGCACca CGUGCCAC m7b Created HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-3648 ggacaCGCGGCacca AGCCGCGG m6b Disrupted HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424

Mutation Mutation ID Sample Name Cancer Type
chr10:g.69208800G>A COSM224370 ME011T [skin][extremity][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-187-3p gctagaaAGACACGc UCGUGUCU m7b Created HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-1248 gctAGAAGGacacgc ACCUUCUU m6b Disrupted HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-4711-3p gctagaAAGACACGc CGUGUCUU m8a Created HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-511-5p gctagAAAGACACgc GUGUCUUU m8a Created HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-6774-3p gctagaaGGACACGc UCGUGUCC m7b Disrupted HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-6830-3p gctaGAAAGACAcgc UGUCUUUC m8a Created HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-6868-3p gctAGAAGGAcacgc UUCCUUCU m7b Disrupted HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424

Mutation Mutation ID Sample Name Cancer Type
chr10:g.69208799A>T COSM1664405 ccRCC-11 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1248 agctAGAAGGacacg ACCUUCUU m6b Disrupted HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-3912-5p agctagATGGACAcg AUGUCCAU m7b Created HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-6868-3p agctAGAAGGAcacg UUCCUUCU m7b Disrupted HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424

Mutation Mutation ID Sample Name Cancer Type
chr10:g.69208796A>G COSM4801607 CHC1183T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4267 ccaAGCTGGAaggac UCCAGCUC m7a Created HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-3667-3p ccaagctGGAAGGac ACCUUCCU m6b Created HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-1287-3p ccaaGCTAGAaggac CUCUAGCC m6b Disrupted HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-1248 ccaagctAGAAGGac ACCUUCUU m6b Disrupted HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-6734-3p ccaagctGGAAGGac CCCUUCCC m6b Created HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424
hsa-miR-6868-3p ccaagctAGAAGGAc UUCCUUCU m7b Disrupted HHKTB_3762_NM_003171|2152|2191|31.493191669222|1.11608401098424

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser