SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001301251
Gene Symbol: ACBD5

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.27240390G>C COSM1347446 TCGA-AA-3713-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1275 cgtgTCCCCCAtctc GUGGGGGA m7b Created HPTA4_395_G1835.1_27529314
hsa-miR-25-5p cgtgTCCGCCatctc AGGCGGAG m6b Disrupted HPTA4_395_G1835.1_27529314
hsa-miR-4525 cgtgTCCCCCatctc GGGGGGAU m6b Created HPTA4_395_G1835.1_27529314
hsa-miR-4665-5p cgtgTCCCCCAtctc CUGGGGGA m7b Created HPTA4_395_G1835.1_27529314
hsa-miR-4730 cgtgTCCGCCAtctc CUGGCGGA m7b Disrupted HPTA4_395_G1835.1_27529314
hsa-miR-5010-5p cgtgTCCCCCatctc AGGGGGAU m6b Created HPTA4_395_G1835.1_27529314
hsa-miR-625-5p cgtgTCCCCCatctc AGGGGGAA m6b Created HPTA4_395_G1835.1_27529314
hsa-miR-1275 cgtgTCCCCCAtctc GUGGGGGA m7b Created HPTA4_395_G1835.1_27529314
hsa-miR-25-5p cgtgTCCGCCatctc AGGCGGAG m6b Disrupted HPTA4_395_G1835.1_27529314
hsa-miR-4525 cgtgTCCCCCatctc GGGGGGAU m6b Created HPTA4_395_G1835.1_27529314
hsa-miR-4665-5p cgtgTCCCCCAtctc CUGGGGGA m7b Created HPTA4_395_G1835.1_27529314
hsa-miR-4730 cgtgTCCGCCAtctc CUGGCGGA m7b Disrupted HPTA4_395_G1835.1_27529314
hsa-miR-5010-5p cgtgTCCCCCatctc AGGGGGAU m6b Created HPTA4_395_G1835.1_27529314
hsa-miR-625-5p cgtgTCCCCCatctc AGGGGGAA m6b Created HPTA4_395_G1835.1_27529314
hsa-miR-1275 cgtgTCCCCCAtctc GUGGGGGA m7b Created HPTA4_395_G1835.1_27529314
hsa-miR-25-5p cgtgTCCGCCatctc AGGCGGAG m6b Disrupted HPTA4_395_G1835.1_27529314
hsa-miR-4525 cgtgTCCCCCatctc GGGGGGAU m6b Created HPTA4_395_G1835.1_27529314
hsa-miR-4665-5p cgtgTCCCCCAtctc CUGGGGGA m7b Created HPTA4_395_G1835.1_27529314
hsa-miR-4730 cgtgTCCGCCAtctc CUGGCGGA m7b Disrupted HPTA4_395_G1835.1_27529314
hsa-miR-5010-5p cgtgTCCCCCatctc AGGGGGAU m6b Created HPTA4_395_G1835.1_27529314
hsa-miR-625-5p cgtgTCCCCCatctc AGGGGGAA m6b Created HPTA4_395_G1835.1_27529314

Mutation Mutation ID Sample Name Cancer Type
chr10:g.27240390G>A COSM4908061 TCGA-EL-A3GZ-01 [thyroid][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-5p cgtgTCCGCCatctc AGGCGGAG m6b Disrupted HPTA4_395_G1835.1_27529314
hsa-miR-3138 cgTGTCCACcatctc UGUGGACA m7b (m6b->m7b) HPTA4_395_G1835.1_27529314
hsa-miR-3165 cgtgTCCACCatctc AGGUGGAU m6b Created HPTA4_395_G1835.1_27529314
hsa-miR-4730 cgtgTCCGCCAtctc CUGGCGGA m7b Disrupted HPTA4_395_G1835.1_27529314
hsa-miR-8071 cgtGTCCACCatctc CGGUGGAC m7b Created HPTA4_395_G1835.1_27529314
hsa-miR-25-5p cgtgTCCGCCatctc AGGCGGAG m6b Disrupted HPTA4_395_G1835.1_27529314
hsa-miR-3138 cgTGTCCACcatctc UGUGGACA m7b (m6b->m7b) HPTA4_395_G1835.1_27529314
hsa-miR-3165 cgtgTCCACCatctc AGGUGGAU m6b Created HPTA4_395_G1835.1_27529314
hsa-miR-4730 cgtgTCCGCCAtctc CUGGCGGA m7b Disrupted HPTA4_395_G1835.1_27529314
hsa-miR-8071 cgtGTCCACCatctc CGGUGGAC m7b Created HPTA4_395_G1835.1_27529314
hsa-miR-25-5p cgtgTCCGCCatctc AGGCGGAG m6b Disrupted HPTA4_395_G1835.1_27529314
hsa-miR-3138 cgTGTCCACcatctc UGUGGACA m7b (m6b->m7b) HPTA4_395_G1835.1_27529314
hsa-miR-3165 cgtgTCCACCatctc AGGUGGAU m6b Created HPTA4_395_G1835.1_27529314
hsa-miR-4730 cgtgTCCGCCAtctc CUGGCGGA m7b Disrupted HPTA4_395_G1835.1_27529314
hsa-miR-8071 cgtGTCCACCatctc CGGUGGAC m7b Created HPTA4_395_G1835.1_27529314

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser