SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001300901
Gene Symbol: TCEAL4

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.103587036G>C COSM366932 LUAD-F00257 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5196-3p tGAGGATGAtgtacc UCAUCCUC m8a (m8a->m7a) HHKTB_1304_NM_024863|620|659|55.1130854211386|3.30687485470472
hsa-miR-499b-3p tgaggaTGATGTacc AACAUCAC m6b Disrupted HHKTB_1304_NM_024863|620|659|55.1130854211386|3.30687485470472
hsa-miR-499a-3p tgaggaTGATGTacc AACAUCAC m6b Disrupted HHKTB_1304_NM_024863|620|659|55.1130854211386|3.30687485470472
hsa-miR-4793-5p tgAGGATGatgtacc ACAUCCUG m6b Disrupted HHKTB_1304_NM_024863|620|659|55.1130854211386|3.30687485470472

Mutation Mutation ID Sample Name Cancer Type
chrX:g.103587001A>T COSM3992275 TCGA-IZ-A6M9-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6794-3p ggGAGTGAaacaagg CUCACUCU m6b Disrupted HHKTB_1304_NM_024863|620|659|55.1130854211386|3.30687485470472
hsa-miR-5096 gggaGTGAAACaagg GUUUCACC m7a Disrupted HHKTB_1304_NM_024863|620|659|55.1130854211386|3.30687485470472
hsa-miR-483-3p gGGAGTGAaacaagg UCACUCCU m7a Disrupted HHKTB_1304_NM_024863|620|659|55.1130854211386|3.30687485470472

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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