SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001300728
Gene Symbol: ATMIN

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.81043592G>A COSM4063060 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-597-3p aagGAGAACCtacct UGGUUCUC m7b Created HHKTB_3930_NM_015251|1083|1122|30.6644234674004|0.484200687348896
hsa-miR-6822-3p aaggAGAGCCTacct AGGCUCUA m7a Disrupted HHKTB_3930_NM_015251|1083|1122|30.6644234674004|0.484200687348896
hsa-miR-6845-3p aAGGAGAGcctacct CCUCUCCU m7b Disrupted HHKTB_3930_NM_015251|1083|1122|30.6644234674004|0.484200687348896
hsa-miR-152-5p aaggAGAACCTacct AGGUUCUG m7a Created HHKTB_3930_NM_015251|1083|1122|30.6644234674004|0.484200687348896

Mutation Mutation ID Sample Name Cancer Type
chr16:g.81043587G>T COSM1324242 TCGA-29-2432-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6758-3p ctcttAATGAGagcc ACUCAUUC m6b Created HHKTB_3930_NM_015251|1083|1122|30.6644234674004|0.484200687348896
hsa-miR-6845-3p ctcttaAGGAGAGcc CCUCUCCU m7b Disrupted HHKTB_3930_NM_015251|1083|1122|30.6644234674004|0.484200687348896

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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