SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001297744
Gene Symbol: PAPD4

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.79686266A>T COSN5810040 EOPC-03_tumor [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-100-3p aaataaAAGCTTaat CAAGCUUG m6b Disrupted HHKTB_2420_NM_001114394|3103|3142|39.1592975360721|0.480823689203026
hsa-miR-1179 aaataAATGCTTaat AAGCAUUC m7a Created HHKTB_2420_NM_001114394|3103|3142|39.1592975360721|0.480823689203026
hsa-miR-208a-5p aaatAAAAGCTtaat GAGCUUUU m7b Disrupted HHKTB_2420_NM_001114394|3103|3142|39.1592975360721|0.480823689203026
hsa-miR-208b-5p aaatAAAAGCTTaat AAGCUUUU m8a Disrupted HHKTB_2420_NM_001114394|3103|3142|39.1592975360721|0.480823689203026
hsa-miR-4503 aaataaaTGCTTAAt UUUAAGCA m7b Created HHKTB_2420_NM_001114394|3103|3142|39.1592975360721|0.480823689203026
hsa-miR-4729 aaATAAATGcttaat UCAUUUAU m7b (m6b->m7b) HHKTB_2420_NM_001114394|3103|3142|39.1592975360721|0.480823689203026
hsa-miR-6792-5p aaataaaTGCTTAat GUAAGCAG m6b Created HHKTB_2420_NM_001114394|3103|3142|39.1592975360721|0.480823689203026

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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