SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001294
Gene Symbol: CLPTM1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.44992621C>T COSM566879 TCGA-64-1678-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548ac tGGTTTTTttcatct CAAAAACC m7b Created HPTA4_1881_G8433.1_45495884
hsa-miR-548aa TGGTTTTTttcatct AAAAACCA m8a Created HPTA4_1881_G8433.1_45495884
hsa-miR-3185 tggttTTCTTCatct AGAAGAAG m6b Disrupted HPTA4_1881_G8433.1_45495884
hsa-miR-548ac tGGTTTTTttcatct CAAAAACC m7b Created HPTA4_1881_G8433.1_45495884
hsa-miR-548aa TGGTTTTTttcatct AAAAACCA m8a Created HPTA4_1881_G8433.1_45495884
hsa-miR-3185 tggttTTCTTCatct AGAAGAAG m6b Disrupted HPTA4_1881_G8433.1_45495884

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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