SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
||||||||
Home | Search | Help | Download |
Transcript ID: | NM_001294 |
---|---|
Gene Symbol: | CLPTM1 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.44993025G>A | COSN9850970 | C0041T | [kidney][NS][other][neoplasm] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1304-5p | cGCCTCAAgtcaggg | UUUGAGGC | m7b | Created | HHHSH_783_CLPTM1|NM_001294|exon_utr3|-6.5062459416168|1.13680982931182 |
hsa-miR-544b | cgCCTCAGGTcaggg | ACCUGAGG | m8a | Disrupted | HHHSH_783_CLPTM1|NM_001294|exon_utr3|-6.5062459416168|1.13680982931182 |
hsa-miR-631 | cgcctCAGGTCaggg | AGACCUGG | m6b | Disrupted | HHHSH_783_CLPTM1|NM_001294|exon_utr3|-6.5062459416168|1.13680982931182 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.44991272C>T | COSM3103613 | pfg143T | [stomach][NS][carcinoma][intestinal_adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-6077 | CTCTTCCCgctcctg | GGGAAGAG | m8a | Disrupted | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-6081 | ctcttcCTGCTCCTg | AGGAGCAG | m8a | Created | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-6165 | ctctTCCTGCTcctg | CAGCAGGA | m7b | Created | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-6077 | CTCTTCCCgctcctg | GGGAAGAG | m8a | Disrupted | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-6081 | ctcttcCTGCTCCTg | AGGAGCAG | m8a | Created | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-6165 | ctctTCCTGCTcctg | CAGCAGGA | m7b | Created | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.44991267C>G | COSM1481214 | TCGA-EW-A1PB-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4661-3p | GGATCCTGttcccgc | CAGGAUCC | m8a | Created | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-6077 | ggatcCTCTTCCCgc | GGGAAGAG | m8a | Disrupted | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-4661-3p | GGATCCTGttcccgc | CAGGAUCC | m8a | Created | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-6077 | ggatcCTCTTCCCgc | GGGAAGAG | m8a | Disrupted | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr19:g.44991257C>T | COSM3535835 | TCGA-EE-A29V-06 | [skin][NS][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4436a | taccTGTCCTGgatc | GCAGGACA | m7b | Disrupted | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-4773 | tacCTGTTCTGgatc | CAGAACAG | m8a | Created | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-5000-3p | taccTGTCCTGgatc | UCAGGACA | m7b | Disrupted | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-589-3p | taccTGTTCTGgatc | UCAGAACA | m7b | Created | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-665 | tacctgTCCTGGatc | ACCAGGAG | m6b | Disrupted | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-4436a | taccTGTCCTGgatc | GCAGGACA | m7b | Disrupted | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-4773 | tacCTGTTCTGgatc | CAGAACAG | m8a | Created | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-5000-3p | taccTGTCCTGgatc | UCAGGACA | m7b | Disrupted | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-589-3p | taccTGTTCTGgatc | UCAGAACA | m7b | Created | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |
hsa-miR-665 | tacctgTCCTGGatc | ACCAGGAG | m6b | Disrupted | HHHSH_781_CLPTM1|NM_001294|exon_CDS|-6.56438512604849|1.2807400076151 |