SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001290083
Gene Symbol: ZNF627

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.11617336C>T COSM222370 ME002T [skin][extremity][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-3p gagaAACCCTacgaa GAGGGUUG m6b Disrupted HPKTB_5228_G6601.1_11728147

Mutation Mutation ID Sample Name Cancer Type
chr19:g.11617335C>T COSM109068 1T [pancreas][NS][carcinoid-endocrine_tumour][gastrinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-876-5p agaGAAATCCtacga UGGAUUUC m7b Created HPKTB_5228_G6601.1_11728147
hsa-miR-296-3p agagaAACCCTacga GAGGGUUG m6b Disrupted HPKTB_5228_G6601.1_11728147
hsa-miR-3167 agaGAAATCCTacga AGGAUUUC m8a Created HPKTB_5228_G6601.1_11728147

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser