SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001288760
Gene Symbol: ZNF180

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477129A>C COSM1394470 TCGA-AA-3510-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-595 agctatACACTTatt GAAGUGUG m6b Created HPTA4_2007_G8844.1_44981342

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477123T>C COSM4581185 CHEWS036 [bone][humerus][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-5p aaacttACTGCACat GGUGCAGU m7b Created HPTA4_2007_G8844.1_44981342

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477048A>G COSM1612385 BN17 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7705 caGAGCTATaaactt AAUAGCUC m7b (m7b->m6b) HPTA4_2006_G8843.1_44981259

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477034C>A COSM1289073 TARGET-30-PASCDX [autonomic_ganglia][NS][neuroblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-450b-5p taTTGCAAAtcaaag UUUUGCAA m7b (m6b->m7b) HPTA4_2006_G8843.1_44981259

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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