SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001288760
Gene Symbol: ZNF180

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477687G>T COSM997985 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3168 tttacaAGAACTCaa GAGUUCUA m7a Disrupted HPKTB_5669_G7136.1_44981915
hsa-miR-4424 tttacaaTAACTCaa AGAGUUAA m6b Created HPKTB_5669_G7136.1_44981915
hsa-miR-5584-3p tttacAAGAACTcaa UAGUUCUU m7b Disrupted HPKTB_5669_G7136.1_44981915
hsa-miR-578 tttACAAGAActcaa CUUCUUGU m7b Disrupted HPKTB_5669_G7136.1_44981915
hsa-miR-643 ttTACAAGaactcaa ACUUGUAU m6b Disrupted HPKTB_5669_G7136.1_44981915

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477129A>C COSM1394470 TCGA-AA-3510-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-595 agctatACACTTatt GAAGUGUG m6b Created HPKTB_5667_G7134.1_44981342

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477123T>C COSM4581185 CHEWS036 [bone][humerus][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-5p aaacttACTGCACat GGUGCAGU m7b Created HPKTB_5667_G7134.1_44981342

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477111G>T COSM168740 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-124-5p catcaaaGAACACat CGUGUUCA m6b Disrupted HPKTB_5667_G7134.1_44981342
hsa-miR-2116-5p catcaAAGAACacat GGUUCUUA m6b Disrupted HPKTB_5667_G7134.1_44981342
hsa-miR-22-5p catcaAAGAACacat AGUUCUUC m6b Disrupted HPKTB_5667_G7134.1_44981342
hsa-miR-4273 catcaaAGAACACat GUGUUCUC m7a Disrupted HPKTB_5667_G7134.1_44981342
hsa-miR-4677-5p catcaAAGAACAcat UUGUUCUU m7b Disrupted HPKTB_5667_G7134.1_44981342

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477048A>G COSM1612385 BN17 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7705 caGAGCTATaaactt AAUAGCUC m7b (m7b->m6b) HPKTB_5666_G7133.1_44981258

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477034C>A COSM1289073 TARGET-30-PASCDX [autonomic_ganglia][NS][neuroblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-450b-5p taTTGCAAAtcaaag UUUUGCAA m7b (m6b->m7b) HPKTB_5666_G7133.1_44981258

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477027G>T COSM997980 TCGA-CA-6717-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-3p catcaaaTAATTCAt GUGAAUUA m7b Created HPKTB_5666_G7133.1_44981258
hsa-miR-4452 catcaaaGAATTCAt UUGAAUUC m7b Disrupted HPKTB_5666_G7133.1_44981258
hsa-miR-944 catcaAATAATTcat AAAUUAUU m7b Created HPKTB_5666_G7133.1_44981258

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477012A>G COSM3732321 255 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-5p aCTGGGGAaaaaccc AUCCCCAG m7b Disrupted HPKTB_5665_G7132.1_44981219
hsa-miR-361-3p aCTGGGGGAaaaccc UCCCCCAG m8a (m7a->m8a) HPKTB_5665_G7132.1_44981219
hsa-miR-3679-3p actGGGGGAAaaccc CUUCCCCC m7b Created HPKTB_5665_G7132.1_44981219
hsa-miR-4446-5p actgGGGAAAaaccc AUUUCCCU m6b Disrupted HPKTB_5665_G7132.1_44981219

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477007AC>C COSM3290410 LS180 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-296-3p gggaaaAACCCTatga GAGGGUUG m6b Disrupted HPKTB_5665_G7132.1_44981219

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477004T>C COSM1394469 TCGA-AY-6197-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-193b-5p aAAACCCCatgaatg CGGGGUUU m7b Created HPKTB_5665_G7132.1_44981219
hsa-miR-296-3p aaAACCCTatgaatg GAGGGUUG m6b Disrupted HPKTB_5665_G7132.1_44981219
hsa-miR-3170 aaAACCCCAtgaatg CUGGGGUU m7b (m6b->m7b) HPKTB_5665_G7132.1_44981219
hsa-miR-376a-3p aaaaccCTATGAatg AUCAUAGA m6b Disrupted HPKTB_5665_G7132.1_44981219
hsa-miR-376b-3p aaaaccCTATGAatg AUCAUAGA m6b Disrupted HPKTB_5665_G7132.1_44981219
hsa-miR-6855-5p aaAACCCCAtgaatg UUGGGGUU m7b (m6b->m7b) HPKTB_5665_G7132.1_44981219
hsa-miR-6890-5p aaaACCCCATGaatg CAUGGGGU m8a Created HPKTB_5665_G7132.1_44981219

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476990G>T COSM4975636 1N43-VS-1T43 [oesophagus][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-580-5p gcAATCATTgtggga UAAUGAUU m7b (m6b->m7b) HPKTB_5665_G7132.1_44981219
Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476990G>A COSM264869 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476956G>A COSM3290409 LS411 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3908 taaacttATTGCTCa GAGCAAUG m7a Created HPKTB_5664_G7131.1_44981176
hsa-miR-3942-5p taaactTATTGCTca AAGCAAUA m7b Created HPKTB_5664_G7131.1_44981176
hsa-miR-4703-5p taaactTATTGCTca UAGCAAUA m7b Created HPKTB_5664_G7131.1_44981176

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476950C>T COSM418180 TCGA-BT-A20T-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3161 tgttgCTTATCAGag CUGAUAAG m8a Created HPKTB_5664_G7131.1_44981176
hsa-miR-4502 tgttgcTCATCAGag GCUGAUGA m7b Disrupted HPKTB_5664_G7131.1_44981176
hsa-miR-556-5p tgttGCTCATCagag GAUGAGCU m7a Disrupted HPKTB_5664_G7131.1_44981176

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476907A>C COSM1233644 587376 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3920 tgTAATCAGTgtggg ACUGAUUA m8a Disrupted HPKTB_5663_G7130.1_44981137
Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476755C>T COSM3535602 TCGA-ER-A19A-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476754C>T COSM73393 TCGA-AZ-6600-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4328 gaAAAACTGtatgaa CCAGUUUU m7b (m6b->m7b) HPKTB_5662_G7129.1_44980968
hsa-miR-485-3p gaaaaacTGTATGAa GUCAUACA m7b Created HPKTB_5662_G7129.1_44980968
hsa-miR-539-3p gaaaaacTGTATGAa AUCAUACA m7b Created HPKTB_5662_G7129.1_44980968
hsa-miR-582-5p gaaaAACTGTAtgaa UUACAGUU m7b Created HPKTB_5662_G7129.1_44980968

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476754C>A COSM1394468 TCGA-CM-5348-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-5p gaaaaacAGTATGaa ACAUACUU m6b Created HPKTB_5662_G7129.1_44980968
hsa-miR-452-5p gaaAAACAGTatgaa AACUGUUU m7b Created HPKTB_5662_G7129.1_44980968
hsa-miR-4676-3p gaaAAACAGTatgaa CACUGUUU m7b Created HPKTB_5662_G7129.1_44980968
hsa-miR-892c-3p gaaAAACAGTatgaa CACUGUUU m7b Created HPKTB_5662_G7129.1_44980968

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476753G>T COSM1525720 TCGA-55-7907-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-329-5p aAAAACCTtatgaat GAGGUUUU m7b Created HPKTB_5662_G7129.1_44980968
hsa-miR-4464 aaAAACCTTatgaat AAGGUUUG m7a (m6a->m7a) HPKTB_5662_G7129.1_44980968
hsa-miR-485-3p aaaaaccGTATGAat GUCAUACA m6b Disrupted HPKTB_5662_G7129.1_44980968
hsa-miR-539-3p aaaaaccGTATGAat AUCAUACA m6b Disrupted HPKTB_5662_G7129.1_44980968

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476748A>C COSM997975 TCGA-BS-A0UF-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p ccgtaTGAATGTaat AACAUUCA m7b Disrupted HPKTB_5662_G7129.1_44980968
hsa-miR-181b-5p ccgtaTGAATGTaat AACAUUCA m7b Disrupted HPKTB_5662_G7129.1_44980968
hsa-miR-181c-5p ccgtaTGAATGTaat AACAUUCA m7b Disrupted HPKTB_5662_G7129.1_44980968
hsa-miR-181d-5p ccgtaTGAATGTaat AACAUUCA m7b Disrupted HPKTB_5662_G7129.1_44980968
hsa-miR-4262 ccgtaTGAATGTaat GACAUUCA m7b Disrupted HPKTB_5662_G7129.1_44980968
hsa-miR-4666a-5p ccgtatgCATGTAat AUACAUGU m6b Created HPKTB_5662_G7129.1_44980968
hsa-miR-485-3p ccGTATGAatgtaat GUCAUACA m6b Disrupted HPKTB_5662_G7129.1_44980968
hsa-miR-539-3p ccGTATGAatgtaat AUCAUACA m6b Disrupted HPKTB_5662_G7129.1_44980968
hsa-miR-5689 ccGTATGCatgtaat AGCAUACA m6b Created HPKTB_5662_G7129.1_44980968

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476586C>T COSM1612384 HCC14 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-5p gagaaacCATTTGAa UCAAAUGC m7a Disrupted HPKTB_5661_G7128.1_44980805
hsa-miR-224-3p gagaaACCATTTgaa AAAAUGGU m7b Disrupted HPKTB_5661_G7128.1_44980805
hsa-miR-29b-2-5p gaGAAACCAtttgaa CUGGUUUC m7b (m7b->m6b) HPKTB_5661_G7128.1_44980805
hsa-miR-3671 gagaaacTATTTGAa AUCAAAUA m7b Created HPKTB_5661_G7128.1_44980805
hsa-miR-4694-3p gagaaaCCATTTGaa CAAAUGGA m7a Disrupted HPKTB_5661_G7128.1_44980805
hsa-miR-522-3p gagaaACCATTTgaa AAAAUGGU m7b Disrupted HPKTB_5661_G7128.1_44980805
hsa-miR-7853-5p gagaaacCATTTGAa UCAAAUGC m7a Disrupted HPKTB_5661_G7128.1_44980805

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44476581G>T COSM997973 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-5p acCATTTGAatgtaa UCAAAUGC m7a (m7a->m6a) HPKTB_5661_G7128.1_44980805
hsa-miR-181a-5p accattTGAATGTaa AACAUUCA m7b Disrupted HPKTB_5661_G7128.1_44980805
hsa-miR-181b-5p accattTGAATGTaa AACAUUCA m7b Disrupted HPKTB_5661_G7128.1_44980805
hsa-miR-181c-5p accattTGAATGTaa AACAUUCA m7b Disrupted HPKTB_5661_G7128.1_44980805
hsa-miR-181d-5p accattTGAATGTaa AACAUUCA m7b Disrupted HPKTB_5661_G7128.1_44980805
hsa-miR-224-3p ACCATTTTaatgtaa AAAAUGGU m8a Created HPKTB_5661_G7128.1_44980805
hsa-miR-323a-3p accatttTAATGTaa CACAUUAC m6b Created HPKTB_5661_G7128.1_44980805
hsa-miR-3662 acCATTTTaatgtaa GAAAAUGA m6b Created HPKTB_5661_G7128.1_44980805
hsa-miR-3671 accATTTGAatgtaa AUCAAAUA m6b Disrupted HPKTB_5661_G7128.1_44980805
hsa-miR-4262 accattTGAATGTaa GACAUUCA m7b Disrupted HPKTB_5661_G7128.1_44980805
hsa-miR-4694-3p aCCATTTGaatgtaa CAAAUGGA m7a Disrupted HPKTB_5661_G7128.1_44980805
hsa-miR-607 accATTTGAAtgtaa GUUCAAAU m7b Disrupted HPKTB_5661_G7128.1_44980805
hsa-miR-7853-5p acCATTTGAatgtaa UCAAAUGC m7a (m7a->m6a) HPKTB_5661_G7128.1_44980805

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser