SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001288760
Gene Symbol: ZNF180

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477399C>T COSM3823368 TCGA-AC-A23H-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1252-5p gggaaaTCCTTCagc AGAAGGAA m6b Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-3167 ggGAAATCCTtcagc AGGAUUUC m8a Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-3185 gggaaaTTCTTCagc AGAAGAAG m6b Created HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-541-5p gggaAATCCTTcagc AAAGGAUU m7b Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-6507-5p gggaaATTCTTCagc GAAGAAUA m7a Created HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-876-5p ggGAAATCCttcagc UGGAUUUC m7b (m7b->m6b) HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477398C>T COSM3892816 TCGA-EE-A3J7-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1252-5p ggaaaTCCTTCagct AGAAGGAA m6b Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-3167 gGAAATCCTtcagct AGGAUUUC m8a (m8a->m7a) HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-4766-5p ggaaatCTTTCAGct UCUGAAAG m7b Created HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-541-5p ggaAATCCTTcagct AAAGGAUU m7b Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-876-5p gGAAATCCttcagct UGGAUUUC m7b Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477383G>A COSM1394472 TCGA-A6-5661-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-576-3p ggagctCACATCTTg AAGAUGUG m8a Created HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477363G>T COSM190644 TCGA-AA-3977-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-101-5p catcaGATAACTcac CAGUUAUC m7b Created HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-146a-3p caTCAGAGaactcac CCUCUGAA m6b Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-2117 catcAGAGAACtcac UGUUCUCU m7b Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-301a-5p caTCAGAGaactcac GCUCUGAC m6b Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-301b-5p caTCAGAGaactcac GCUCUGAC m6b Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-3168 catcagAGAACTCac GAGUUCUA m7a Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-3191-5p catCAGAGAactcac CUCUCUGG m6b Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-3192-3p cATCAGAGaactcac CUCUGAUC m7a Disrupted HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-3921 caTCAGAGAactcac UCUCUGAG m7a (m7a->m6a) HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-4424 catcagaTAACTCac AGAGUUAA m6b Created HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234
hsa-miR-4653-5p caTCAGAGAactcac UCUCUGAG m7a (m7a->m6a) HHKTB_2047_NM_013256|1364|1403|42.681562393814|0.398452720804234

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477347G>T COSM4743121 T578 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4713-5p cagGGGAGAAacctt UUCUCCCA m7a Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-629-3p cagGGGAGAAacctt GUUCUCCC m7b Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-6867-3p cagGGGAGAaacctt CUCUCCCU m6b Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477332T>C COSM190643 TCGA-AA-A00E-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p aTGAATGTagtgaat AACAUUCA m7b Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-181b-2-3p atgaatgCAGTGAat CUCACUGA m6b Created HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-181b-3p atgaatgCAGTGAat CUCACUGA m6b Created HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-181b-5p aTGAATGTagtgaat AACAUUCA m7b Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-181c-5p aTGAATGTagtgaat AACAUUCA m7b Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-181d-5p aTGAATGTagtgaat AACAUUCA m7b Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-20a-3p atgAATGCAGTgaat ACUGCAUU m8a Created HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-217 atgaATGCAGTgaat UACUGCAU m7b Created HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-4262 aTGAATGTagtgaat GACAUUCA m7b Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-4418 atgaaTGCAGTGaat CACUGCAG m7a Created HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-4420 atgaatgCAGTGAat GUCACUGA m6b Created HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-4999-3p atgaatGTAGTGAat UCACUACC m7a Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-6807-3p atgaATGCAGTGaat CACUGCAU m8a Created HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-6890-3p atgaatGCAGTGaat CCACUGCC m6b Created HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477330G>C COSM213749 SA106 [breast][NS][carcinoma][basal_(triple-negative)_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-222-5p gaatgTACTGAatgt CUCAGUAG m6b Created HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-4999-3p gaatGTAGTGAatgt UCACUACC m7a Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234

Mutation Mutation ID Sample Name Cancer Type
chr19:g.44477328G>A COSM1582415 2000362 [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-181a-5p atgtagTGAATGTgg AACAUUCA m7b Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-181b-5p atgtagTGAATGTgg AACAUUCA m7b Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-181c-5p atgtagTGAATGTgg AACAUUCA m7b Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-181d-5p atgtagTGAATGTgg AACAUUCA m7b Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-4262 atgtagTGAATGTgg GACAUUCA m7b Disrupted HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-4699-3p atgtAGTAAATgtgg AAUUUACU m7b Created HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234
hsa-miR-4999-3p atGTAGTGAatgtgg UCACUACC m7a (m7a->m6a) HHKTB_3858_NM_013256|1404|1443|31.0788075683112|0.398452720804234

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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