SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001286722
Gene Symbol: FAM120A

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.93564452C>G COSM3664493 HCC106 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-876-5p tgcaataGAAATCCt UGGAUUUC m7b Created HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-3167 tgcaataGAAATCCt AGGAUUUC m7b Created HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-4482-3p tgcAATAGAAAtcct UUUCUAUU m8a Created HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-876-5p tgcaataGAAATCCt UGGAUUUC m7b Created HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-3167 tgcaataGAAATCCt AGGAUUUC m7b Created HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-4482-3p tgcAATAGAAAtcct UUUCUAUU m8a Created HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964

Mutation Mutation ID Sample Name Cancer Type
chr9:g.93564447C>T COSM3930209 TCGA-CS-5397-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6504-3p aaacgTGTAATacaa CAUUACAG m6b Created HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-92a-3p aaacGTGCAATAcaa UAUUGCAC m8a Disrupted HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-92b-3p aaacGTGCAATAcaa UAUUGCAC m8a Disrupted HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-367-3p aaacGTGCAATacaa AAUUGCAC m7b Disrupted HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-25-3p aaacGTGCAATacaa CAUUGCAC m7b Disrupted HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-32-5p aaacGTGCAATAcaa UAUUGCAC m8a Disrupted HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-363-3p aaacGTGCAATacaa AAUUGCAC m7b Disrupted HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-367-3p aaacGTGCAATacaa AAUUGCAC m7b Disrupted HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-363-3p aaacGTGCAATacaa AAUUGCAC m7b Disrupted HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-32-5p aaacGTGCAATAcaa UAUUGCAC m8a Disrupted HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-25-3p aaacGTGCAATacaa CAUUGCAC m7b Disrupted HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-92b-3p aaacGTGCAATAcaa UAUUGCAC m8a Disrupted HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-92a-3p aaacGTGCAATAcaa UAUUGCAC m8a Disrupted HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964
hsa-miR-6504-3p aaacgTGTAATacaa CAUUACAG m6b Created HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964

Mutation Mutation ID Sample Name Cancer Type
chr9:g.93564443C>T COSM1111291 TCGA-BS-A0UL-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5589-3p tctaaaATGTGCAat UGCACAUG m7a Created HHKTB_169_NM_014612|3276|3315|315.553492843587|0.784359087564964

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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