SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001286537
Gene Symbol: C2orf49

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.105343109C>T COSM3564676 TCGA-FS-A1ZS-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2681-3p aCCATGATttaacgc UAUCAUGG m7b Created HHKTB_3585_NM_024093|529|568|31.493191669222|0.710610785268938
hsa-miR-551b-5p accaTGATTTaacgc GAAAUCAA m6b Created HHKTB_3585_NM_024093|529|568|31.493191669222|0.710610785268938
hsa-miR-224-5p accaTGACTTaacgc CAAGUCAC m6b Disrupted HHKTB_3585_NM_024093|529|568|31.493191669222|0.710610785268938
hsa-miR-224-5p accaTGACTTaacgc CAAGUCAC m6b Disrupted HHKTB_3585_NM_024093|529|568|31.493191669222|0.710610785268938
hsa-miR-2681-3p aCCATGATttaacgc UAUCAUGG m7b Created HHKTB_3585_NM_024093|529|568|31.493191669222|0.710610785268938
hsa-miR-551b-5p accaTGATTTaacgc GAAAUCAA m6b Created HHKTB_3585_NM_024093|529|568|31.493191669222|0.710610785268938

Mutation Mutation ID Sample Name Cancer Type
chr2:g.105343108A>G COSM1004771 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-224-5p aaccaTGACTTaacg CAAGUCAC m6b Disrupted HHKTB_3585_NM_024093|529|568|31.493191669222|0.710610785268938

Mutation Mutation ID Sample Name Cancer Type
chr2:g.105343083A>G COSM4083952 TCGA-HU-A4H2-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-126-5p acacaaTAATAATGa CAUUAUUA m8a Disrupted HHKTB_3585_NM_024093|529|568|31.493191669222|0.710610785268938
hsa-miR-382-3p acacAATGATaatga AAUCAUUC m6b Created HHKTB_3585_NM_024093|529|568|31.493191669222|0.710610785268938
hsa-miR-4289 aCACAATGataatga GCAUUGUG m7b Created HHKTB_3585_NM_024093|529|568|31.493191669222|0.710610785268938
hsa-miR-4795-3p acacAATAATAatga AUAUUAUU m7b Disrupted HHKTB_3585_NM_024093|529|568|31.493191669222|0.710610785268938

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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