SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001286514
Gene Symbol: ATF7IP
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.14498761A>G COSN8539144 tumor_4163639 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5580-3p tatggcCATATGTcc CACAUAUG m7b Disrupted HHKTB_2452_NM_018179|4622|4661|38.7449134351613|0.496240243411766
hsa-miR-548s taTGGCCATatgtcc AUGGCCAA m7a (m7a->m6a) HHKTB_2452_NM_018179|4622|4661|38.7449134351613|0.496240243411766
hsa-miR-4435 taTGGCCATatgtcc AUGGCCAG m7a (m7a->m6a) HHKTB_2452_NM_018179|4622|4661|38.7449134351613|0.496240243411766
hsa-miR-3187-3p tATGGCCAtatgtcc UUGGCCAU m7b Disrupted HHKTB_2452_NM_018179|4622|4661|38.7449134351613|0.496240243411766

Mutation Mutation ID Sample Name Cancer Type
chr12:g.14424695C>T COSM4508579 CSCC-11-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4699-5p atctATCTTCTagtg AGAAGAUU m7a Created HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-4662a-3p atCTATCTTctagtg AAAGAUAG m7b (m6b->m7b) HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-3916 atctaTCCTCTagtg AAGAGGAA m6b Disrupted HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-3679-5p atcTATCCTCtagtg UGAGGAUA m7b Disrupted HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-877-5p atctaTCCTCTAgtg GUAGAGGA m7b Disrupted HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-1185-5p atcTATCCTCTagtg AGAGGAUA m8a Disrupted HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-5197-3p atctaTCTTCTagtg AAGAAGAG m6b Created HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-520g-5p atctatCCTCTAGtg UCUAGAGG m7b Disrupted HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-6859-5p atctaTCCTCTagtg GAGAGGAA m6b Disrupted HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-1185-5p atcTATCCTCTagtg AGAGGAUA m8a Disrupted HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-3679-5p atcTATCCTCtagtg UGAGGAUA m7b Disrupted HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-3916 atctaTCCTCTagtg AAGAGGAA m6b Disrupted HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-4662a-3p atCTATCTTctagtg AAAGAUAG m7b (m6b->m7b) HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-4699-5p atctATCTTCTagtg AGAAGAUU m7a Created HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-877-5p atctaTCCTCTAgtg GUAGAGGA m7b Disrupted HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-5197-3p atctaTCTTCTagtg AAGAAGAG m6b Created HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-520g-5p atctatCCTCTAGtg UCUAGAGG m7b Disrupted HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766
hsa-miR-6859-5p atctaTCCTCTagtg GAGAGGAA m6b Disrupted HHKTB_3536_NM_018179|911|950|31.493191669222|0.496240243411766

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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