SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001281771
Gene Symbol: ZMYND8

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.47221452G>A COSM4099056 TCGA-HU-8602-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7162-5p AGGAAGCAgatgctg UGCUUCCU m8a Created HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769
hsa-miR-516b-3p AGGAAGCAgatgctg UGCUUCCU m8a Created HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769
hsa-miR-516a-3p AGGAAGCAgatgctg UGCUUCCU m8a Created HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769
hsa-miR-4686 aggaAGCAGATgctg UAUCUGCU m7b Created HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769
hsa-miR-516a-3p AGGAAGCAgatgctg UGCUUCCU m8a Created HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769
hsa-miR-7162-5p AGGAAGCAgatgctg UGCUUCCU m8a Created HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769
hsa-miR-516b-3p AGGAAGCAgatgctg UGCUUCCU m8a Created HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769
hsa-miR-4686 aggaAGCAGATgctg UAUCUGCU m7b Created HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769

Mutation Mutation ID Sample Name Cancer Type
chr20:g.47221429C>T COSM248491 PR-05-3440 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3591-5p acagaaACACTAAAt UUUAGUGU m8a Disrupted HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769
hsa-miR-4255 acagaAACACTaaat CAGUGUUC m6b Disrupted HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769

Mutation Mutation ID Sample Name Cancer Type
chr20:g.47221428A>T COSM1632329 RK126_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4255 cagaAACACTaaata CAGUGUUC m6b Disrupted HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769
hsa-miR-3591-5p cagaaACACTAAAta UUUAGUGU m8a Disrupted HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769
hsa-miR-3591-5p cagaaACACTAAAta UUUAGUGU m8a Disrupted HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769
hsa-miR-4255 cagaAACACTaaata CAGUGUUC m6b Disrupted HHKTB_1300_NM_183047|3195|3234|55.1130854211386|0.533915669253769

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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