SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001278315
Gene Symbol: INSC
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.15175850G>A COSM1507537 TCGA-78-7152-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1236-3p cctGGAAGAGGatgc CCUCUUCC m8a Disrupted HHHSH_1711_INSC|NM_001031853|exon_CDS|-2.9507334653405|0.803922326893066
hsa-miR-3180-5p cCTGGAAGaggatgc CUUCCAGA m7a Disrupted HHHSH_1711_INSC|NM_001031853|exon_CDS|-2.9507334653405|0.803922326893066
hsa-miR-501-5p cctggaAAAGGATgc AAUCCUUU m7b Created HHHSH_1711_INSC|NM_001031853|exon_CDS|-2.9507334653405|0.803922326893066
hsa-miR-5196-3p cctggaaGAGGATGc UCAUCCUC m7b Disrupted HHHSH_1711_INSC|NM_001031853|exon_CDS|-2.9507334653405|0.803922326893066
hsa-miR-6881-3p cctggAAGAGGATgc AUCCUCUU m8a Disrupted HHHSH_1711_INSC|NM_001031853|exon_CDS|-2.9507334653405|0.803922326893066
hsa-miR-877-3p cctgGAAGAGGAtgc UCCUCUUC m8a Disrupted HHHSH_1711_INSC|NM_001031853|exon_CDS|-2.9507334653405|0.803922326893066

Mutation Mutation ID Sample Name Cancer Type
chr11:g.15175836C>A COSM3979436 J73_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-218-5p gccAAGCACAtcagc UUGUGCUU m7b Created HHHSH_1711_INSC|NM_001031853|exon_CDS|-2.9507334653405|0.803922326893066
hsa-miR-27a-5p gccAAGCCCatcagc AGGGCUUA m6b Disrupted HHHSH_1711_INSC|NM_001031853|exon_CDS|-2.9507334653405|0.803922326893066
hsa-miR-636 gcCAAGCACAtcagc UGUGCUUG m8a Created HHHSH_1711_INSC|NM_001031853|exon_CDS|-2.9507334653405|0.803922326893066

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser