SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001263
Gene Symbol: CDS1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.84649132C>T COSN6846335 RK187_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-454-3p agttctcTTGCACTt UAGUGCAA m7b Created HHKTB_1621_NM_001263|2311|2350|47.6541716047439|0.168681669059176
hsa-miR-4722-5p agttCTCCTGCactt GGCAGGAG m7b Disrupted HHKTB_1621_NM_001263|2311|2350|47.6541716047439|0.168681669059176
hsa-miR-4768-3p agtTCTCCTGcactt CCAGGAGA m7b Disrupted HHKTB_1621_NM_001263|2311|2350|47.6541716047439|0.168681669059176
hsa-miR-130a-3p agttctcTTGCACTt CAGUGCAA m7b Created HHKTB_1621_NM_001263|2311|2350|47.6541716047439|0.168681669059176
hsa-miR-130b-3p agttctcTTGCACTt CAGUGCAA m7b Created HHKTB_1621_NM_001263|2311|2350|47.6541716047439|0.168681669059176
hsa-miR-301a-3p agttctcTTGCACTt CAGUGCAA m7b Created HHKTB_1621_NM_001263|2311|2350|47.6541716047439|0.168681669059176
hsa-miR-301b-3p agttctcTTGCACTt CAGUGCAA m7b Created HHKTB_1621_NM_001263|2311|2350|47.6541716047439|0.168681669059176
hsa-miR-3666 agttctcTTGCACTt CAGUGCAA m7b Created HHKTB_1621_NM_001263|2311|2350|47.6541716047439|0.168681669059176
hsa-miR-3925-5p aGTTCTCTTgcactt AAGAGAAC m8a (m7a->m8a) HHKTB_1621_NM_001263|2311|2350|47.6541716047439|0.168681669059176
hsa-miR-4295 agttctcTTGCACTt CAGUGCAA m7b Created HHKTB_1621_NM_001263|2311|2350|47.6541716047439|0.168681669059176

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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