SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001256379
Gene Symbol: MCMBP

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr10:g.119831587A>G COSM4701224 T3262 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3065-3p gtctctcGGTGCTGg UCAGCACC m7b Created HHKTB_2582_NM_024834|2111|2150|38.3305293342505|1.53245339075712
hsa-miR-383-3p gtctctcAGTGCTGg ACAGCACU m7b Disrupted HHKTB_2582_NM_024834|2111|2150|38.3305293342505|1.53245339075712
hsa-miR-6761-5p gtCTCTCAGtgctgg UCUGAGAG m7b (m7b->m6b) HHKTB_2582_NM_024834|2111|2150|38.3305293342505|1.53245339075712
hsa-miR-4523 gtcTCTCGGTgctgg GACCGAGA m7b Created HHKTB_2582_NM_024834|2111|2150|38.3305293342505|1.53245339075712

Mutation Mutation ID Sample Name Cancer Type
chr10:g.119831586G>T COSM1346140 TCGA-G4-6628-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6761-5p tCTCTCAGtgctggt UCUGAGAG m7b Disrupted HHKTB_2582_NM_024834|2111|2150|38.3305293342505|1.53245339075712
hsa-miR-4712-3p tCTCTCATTgctggt AAUGAGAG m8a (m7a->m8a) HHKTB_2582_NM_024834|2111|2150|38.3305293342505|1.53245339075712
hsa-miR-383-3p tctctcAGTGCTGgt ACAGCACU m7b Disrupted HHKTB_2582_NM_024834|2111|2150|38.3305293342505|1.53245339075712
hsa-miR-3908 tctctCATTGCTggt GAGCAAUG m7b Created HHKTB_2582_NM_024834|2111|2150|38.3305293342505|1.53245339075712

Mutation Mutation ID Sample Name Cancer Type
chr10:g.119831551C>A COSM4414436 TCGA-B1-A654-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4691-3p acgaTGGCTGagagc CCAGCCAC m6b Disrupted HHKTB_2582_NM_024834|2111|2150|38.3305293342505|1.53245339075712
hsa-miR-6870-3p acgatGGATGAGagc GCUCAUCC m7b Created HHKTB_2582_NM_024834|2111|2150|38.3305293342505|1.53245339075712
hsa-miR-7151-5p acGATGGATgagagc GAUCCAUC m7b (m6b->m7b) HHKTB_2582_NM_024834|2111|2150|38.3305293342505|1.53245339075712
hsa-miR-3157-5p acgaTGGCTGAgagc UUCAGCCA m7b Disrupted HHKTB_2582_NM_024834|2111|2150|38.3305293342505|1.53245339075712

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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