SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001244701
Gene Symbol: ZFP36L1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.68792924C>T COSM4832133 TCGA-EK-A2RJ-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4457 ccacCCTTGTGtctg UCACAAGG m7b Created HPSLB_2468_G2980.1_69259640
hsa-miR-4731-3p ccaccCTTGTGTctg CACACAAG m7b Created HPSLB_2468_G2980.1_69259640
hsa-miR-4801 ccaccCTTGTGTctg UACACAAG m7b Created HPSLB_2468_G2980.1_69259640
hsa-miR-6804-5p cCACCCTCgtgtctg UGAGGGUG m7b Disrupted HPSLB_2468_G2980.1_69259640

Mutation Mutation ID Sample Name Cancer Type
chr14:g.68792924C>G COSM553650 TCGA-50-5935-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4733-3p ccacCCTGGTGtctg CCACCAGG m7b Created HPSLB_2468_G2980.1_69259640
hsa-miR-6753-5p ccaCCCTGGTGtctg CACCAGGG m8a Created HPSLB_2468_G2980.1_69259640
hsa-miR-6804-5p cCACCCTCgtgtctg UGAGGGUG m7b Disrupted HPSLB_2468_G2980.1_69259640

Mutation Mutation ID Sample Name Cancer Type
chr14:g.68792915C>G COSM470164 TCGA-B0-4823-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6767-5p tGTCTGCGAccatct UCGCAGAC m8a (m7a->m8a) HPSLB_2468_G2980.1_69259640

Mutation Mutation ID Sample Name Cancer Type
chr14:g.68792909C>T COSM1323421 TCGA-24-1850-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-224-3p ccACCATTTTcgact AAAAUGGU m8a Created HPSLB_2468_G2980.1_69259640
hsa-miR-4426 ccaCCATCTTCgact GAAGAUGG m8a Disrupted HPSLB_2468_G2980.1_69259640
hsa-miR-4647 ccaCCATCTTCgact GAAGAUGG m8a Disrupted HPSLB_2468_G2980.1_69259640
hsa-miR-4662b ccaCCATCTTcgact AAAGAUGG m7b Disrupted HPSLB_2468_G2980.1_69259640
hsa-miR-522-3p ccACCATTTTcgact AAAAUGGU m8a Created HPSLB_2468_G2980.1_69259640

Mutation Mutation ID Sample Name Cancer Type
chr14:g.68789543C>A COSM165705 PD4098a [breast][NS][carcinoma][lobular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273f tCCATCTCagatgac GGAGAUGG m7b Disrupted HPSLB_2467_G2978.1_69256256
hsa-miR-200a-5p tccatcTAAGATGac CAUCUUAC m7a Created HPSLB_2467_G2978.1_69256256
hsa-miR-200b-5p tccatcTAAGATGac CAUCUUAC m7a Created HPSLB_2467_G2978.1_69256256
hsa-miR-3200-5p tccatCTCAGATgac AAUCUGAG m7b Disrupted HPSLB_2467_G2978.1_69256256
hsa-miR-4251 tccaTCTCAGatgac CCUGAGAA m6b Disrupted HPSLB_2467_G2978.1_69256256
hsa-miR-4329 tccaTCTCAGatgac CCUGAGAC m6b Disrupted HPSLB_2467_G2978.1_69256256
hsa-miR-452-3p tccatctCAGATGAc CUCAUCUG m7b Disrupted HPSLB_2467_G2978.1_69256256
hsa-miR-4708-5p tcCATCTCagatgac AGAGAUGC m6b Disrupted HPSLB_2467_G2978.1_69256256
hsa-miR-6088 tcCATCTCagatgac AGAGAUGA m6b Disrupted HPSLB_2467_G2978.1_69256256
hsa-miR-8061 tccATCTAAGatgac CUUAGAUU m7a Created HPSLB_2467_G2978.1_69256256

Mutation Mutation ID Sample Name Cancer Type
chr14:g.68789026G>C COSN1170443 HCC116T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-5p cacaACTGCACCttc GGUGCAGU m8a Disrupted HPSLB_2463_G2974.1_69255751
hsa-miR-18a-5p cacaactGCACCTTc UAAGGUGC m7b Disrupted HPSLB_2463_G2974.1_69255751
hsa-miR-18b-5p cacaactGCACCTTc UAAGGUGC m7b Disrupted HPSLB_2463_G2974.1_69255751
hsa-miR-4735-3p cacaactGCACCTTc AAAGGUGC m7b Disrupted HPSLB_2463_G2974.1_69255751
hsa-miR-6880-5p cacaaCTCCACCttc UGGUGGAG m7b Created HPSLB_2463_G2974.1_69255751

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser